Gene Dfer_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4084 
Symbol 
ID8227682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4931475 
End bp4931972 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content50% 
IMG OID644931927 
ProductNADH-quinone oxidoreductase, E subunit 
Protein accessionYP_003088452 
Protein GI255037831 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID[TIGR01958] NADH-quinone oxidoreductase, E subunit 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.146829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT CACCTAATCT GGTTGCGTTC ACACCCGAAC GACTTGAAAC AGTAAAAGAG 
ATTATCGCAC GTTATCCGGA GGGCCGCCAA AAATCGGCTC TTTTGCCTGT TTTGCACGTG
GCCCAGGAAC AATGGGGCTG GCTAAGCAGC GAAGTGATGG ATTATGTAGC GGGAATTTTA
AATATAGAAC CCGTGGAGGT TTACGAGGTA GCGACCTTTT ACACCATGTA CCACCTCGAC
CCGGTGGGCA AACACGTGAT CGAATATTGC CGTACAGGCC CTTGCTGCCT TATGGGCGGT
GAAGATGTCT ACGGGCATTT GAAGAAAAAA CTGGGCATCG AAGCCGGTGA AACCACCGCC
GACGGCAAGT TTACATTGAA AGAAGTAGAA TGCCTCGCCG CATGCGGCTG GGGGCCGGTT
TTCCAGATCC GCGAGCAGTT CTACATGAAC CTGACCAACG AGAAGGTCGA CCAAATCATA
GAAGATTTAA GTAAATAA
 
Protein sequence
MTESPNLVAF TPERLETVKE IIARYPEGRQ KSALLPVLHV AQEQWGWLSS EVMDYVAGIL 
NIEPVEVYEV ATFYTMYHLD PVGKHVIEYC RTGPCCLMGG EDVYGHLKKK LGIEAGETTA
DGKFTLKEVE CLAACGWGPV FQIREQFYMN LTNEKVDQII EDLSK