Gene Dfer_4082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4082 
Symbol 
ID8227680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4928958 
End bp4930073 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content52% 
IMG OID644931925 
Productferredoxin 
Protein accessionYP_003088450 
Protein GI255037829 
COG category[C] Energy production and conversion 
COG ID[COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.237691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.121556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAG TTAAACCCCA ATTATTGAAA ATTACATTCG ATGGCATCGA GGTCGAAGTA 
GAACCGGGCA CAACCATCAT GCAGGCGGCG CGCAAAATCG CCGAGGCAGA TGACAGCCAG
GGACACCTCG TTCCGCCGGC GATGTGCTAC TATAAACCGC TTACCGCTTC CGGAGGTAAA
TGCCGCGCTT GTTTGGTGAA AGTTACCGCA GGCTCAGCCA AAGACCCCCG CCCGATGCCG
AAACTCGTTC CTTCCTGCAT TACACAGGTT CAGGATGGAA TGGTGGTTGA AAACACCACC
AACGAAGCGG TACTCGATAC CCGCAAGAGC ATTGTAGAAT TCCTGCTGAT CAATCACCCG
CTCGACTGCC CTATCTGCGA CCAGGCCGGT GAATGCCATT TGCAGGATTT TGCATTTGAG
CACGGTTCGG TGAAAACGCG CTACGAGGAA GAAAGAAGGA CTTTTGATAA AATCGATATC
GGCCCGTACG TGCAGCTGCA CATGACGCGC TGCATTCTCT GCTACCGCTG CGTGTACACT
GCCGACCAGA TCACCAACAA GCGTGTTCAC GGCGTAATGA ACCGCGGGGA TGCTTCGGAA
ATCAGCACTT ACATCGAAAA AGCGATCGAT AACGACTTCT CCGGAAACGT GATCGACGTG
TGCCCGGTAG GTGCATTGAC CGACAAGACA TTCCGCTTCA AAAACCGCGT ATGGTTCACC
AAGCCCGAAG ACGCACACCG CGATTGCGAC AAATGCTGCG GTAAAACGAC TTTGTGGTAC
CGTGGTGATG AAGTAATCCG CGTGACTGCC CGCAAGAATA CCTGGGGTGA GGTGACCGAC
TTCATTTGCA ATACCTGCCG TTTTGAGAAG AAAAACACCA GCGACTGGGT TTTGGAAGGT
CCTACCAAAG TGAAACGCAG CTCGGTGATT TCCGCCAACA AATACCGCAA AGACCTGGTA
GCCAAACCCG ATTTCGCATT GAAACTGGCA GCAACGCAGT TCAAACAGAT CGACGACTCG
CGCCCGTATG TGACCGACGA GGAAACGATC CGTCACCAAA GCATCGAGAA TAACGATAAG
GCCAACCACC GTTCGCTGGC GGCCAACAAC AATTAA
 
Protein sequence
MEEVKPQLLK ITFDGIEVEV EPGTTIMQAA RKIAEADDSQ GHLVPPAMCY YKPLTASGGK 
CRACLVKVTA GSAKDPRPMP KLVPSCITQV QDGMVVENTT NEAVLDTRKS IVEFLLINHP
LDCPICDQAG ECHLQDFAFE HGSVKTRYEE ERRTFDKIDI GPYVQLHMTR CILCYRCVYT
ADQITNKRVH GVMNRGDASE ISTYIEKAID NDFSGNVIDV CPVGALTDKT FRFKNRVWFT
KPEDAHRDCD KCCGKTTLWY RGDEVIRVTA RKNTWGEVTD FICNTCRFEK KNTSDWVLEG
PTKVKRSSVI SANKYRKDLV AKPDFALKLA ATQFKQIDDS RPYVTDEETI RHQSIENNDK
ANHRSLAANN N