Gene Dfer_4070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4070 
Symbol 
ID8227668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4918413 
End bp4918742 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content49% 
IMG OID644931913 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003088438 
Protein GI255037817 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00101139 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00129674 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCTTAG CTATTTGGGG ATTTCAAAAA GCCGCTAAAT TTGTCAAGTC ACTCAAAAAC 
AAGCACACTA TGACGGATTT CGGGAGTAAT TTCAGGAAGC TGAGGGAATG GGCAGGACTA
TCCCAGGAGG CATTGGGAGC TAGTTTGAAT GTGTCGGCTT CCGTGATCAA CAGAATTGAG
AATAACAAAA GGAGACTGGA CATTCAGATA CTGCAAAACC TTGCGAACGC TTTGCAGCTC
GATGTGGCGC TGGTAGTGGC GGTAATGTTT AAAGGGAAGT CGGCATTGCC CAAGCAGCGG
GCGGAGAAAG CGTTGCCGGT CCCCGCCTGA
 
Protein sequence
MGLAIWGFQK AAKFVKSLKN KHTMTDFGSN FRKLREWAGL SQEALGASLN VSASVINRIE 
NNKRRLDIQI LQNLANALQL DVALVVAVMF KGKSALPKQR AEKALPVPA