| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4053 |
|---|
| Symbol | |
|---|
| ID | 8227651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 4902406 |
|---|
| End bp | 4903197 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644931896 |
|---|
| Product | Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase |
|---|
| Protein accession | YP_003088421 |
|---|
| Protein GI | 255037800 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000106872 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAGC ATAAGGAAAT TCTTTCCATC GCATTGGTGC AGGCCGATCT GCATTGGGAA
GATGTGACGG CCAACCTTGC TTCTTTTGAA GAAAAGCTGG CTGCGTTGCC GGAGGCGGTC
GATGTGATCG TGCTGCCGGA AATGTTCAAT ACCGGTTTTA CGATGAACAC CGCGCTCGCC
GAGCCGATGA ACCTCACCAC CACGCGCTGG ATGAAGCAAA TTGCGAAACA GCAGAATGCA
TTGGTGGTAG GAAGTTTCGC GGTGAATGAC GGCGGCCGCT TTTTTAACCG CCTTCTTTGT
GTACGCCCGG ACGGGACCTA TTCGCAAAGC GACAAGCGGC ATTTGTTCAG AATGGGGGAG
GAGCACAGTC ATTACACCGC GGGCAATGCA CGGCTGACGA TTGAATGGAG GGGCTGGAAG
TTCTGCCCGC TCGTTTGCTA TGACCTGCGC TTCCCGGTAT GGAGCCGTAA TCTGCAAAGT
GACCCGTACG ACATCTTATT TTTTGTAGCA AACTGGCCCG CACGCCGCGC GCATGCGTGG
AGCACGCTGT TGCAGGCGAG GGCGATCGAA AATCAGTGTT ATGTGATGGG CGTAAACCGC
GTCGGGACCG ACGGGAACGG GCTGGAATAT CGCGGAGACT CCGTGGCGCT CGATTACCTG
GGTGAACCCA TTGCCATGCT CACAAACCAG GAAACCGAAA AGATCGTGCA CATTTCGAAG
GCGGAGCTTG CGACATACCG GGAGAAGTTT CCGGCATTGT CGGATGCCGA CGATTTTGAG
ATCCGCTGTT GA
|
|---|
| Protein sequence | MQEHKEILSI ALVQADLHWE DVTANLASFE EKLAALPEAV DVIVLPEMFN TGFTMNTALA
EPMNLTTTRW MKQIAKQQNA LVVGSFAVND GGRFFNRLLC VRPDGTYSQS DKRHLFRMGE
EHSHYTAGNA RLTIEWRGWK FCPLVCYDLR FPVWSRNLQS DPYDILFFVA NWPARRAHAW
STLLQARAIE NQCYVMGVNR VGTDGNGLEY RGDSVALDYL GEPIAMLTNQ ETEKIVHISK
AELATYREKF PALSDADDFE IRC
|
|---|
| |