Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4037 |
Symbol | |
ID | 8227635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 4889023 |
End bp | 4890564 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644931880 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Protein accession | YP_003088405 |
Protein GI | 255037784 |
COG category | [C] Energy production and conversion |
COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00158153 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTCAGAAT ACTTTAAAAA TATATCCGAC GGCATCAGTA CGACCCTCAC GGGCATGCGG CTGACGTTAC GGCACCTCTG GAATGCGCGC AAAAGCCGTA AGCCTGCGGA TATCCGTTCA TCCAGCTTTT ACGACCAGCA GGATGGGATC GTCACCATCC AATACCCCCA GGAAACCATT CCCATTCCAG ACAATGGCAG GTACCGTTTG CACAATGAAA TGGACGACTG CATTGTTTGC GACAAATGTG CGAAGGTTTG TCCCGTGGAT TGTATTGACA TTGAGCCTAT TAAAGCCGTA GAGGACGTTG GTCGCGCCTC CGACGGTTCG CCGATCCGTT TGTATGCGGC GAAGTTCGAT ATCGACATGG CCAAATGCTG TTATTGCGGT CTTTGCACCA CGGTTTGTCC GACGGAATGC CTTACGATGA CGAAAACTTT CGATTACAGC GAGCTGGATG TGCGGGATAT GGTTTACAAT TATTCCAACC TTACAACCGA GCAAGCTGAC GAAAAGCGCA TGCTGCTGGA ACAATTCCAG AAGGAAAAAG AGGCGTTGAA GGCCGCCAAA GCCGCCACGC CAGCCGCAGC TGCATCAGCT GGGGCCGCAC CGGCTACGAC TGCACCGGCG CGACCGGTTT TCAAACCAAC CGCGAAGCCC AAGCCGGCAG AAGAGCCTGC ATCTGAAACT GCCAGCCAGG AGCCAGCCGC GCCGACTCCA AAACCGGCAT TCAAACCGGT CATGAAGCCA AAAAAGGCGG AAGAAAACAC ACCAGCTGTC GATCCCGCTC CTACGGAAAA GCCTACCGCC GGCAAACCGG TATTCCGCCC TACATTGAAA CCGAAAGTGG TATCGGAGGA AAATGCAGAG AAACCGGTTG CCGAAACGCC AGCTGAACCG GCAGAAAAAC CGGTTGCGGC AAAACCTCCG TTCCGCCCGA CCATGAAGCC GAAGGCTGCT TCGGAGGAAA ATGCAGAGAA ACCGGTTGCG GAAACGCCTG CTGAACCAGC AGAAAAACCG GTTGCAGCGA AACCTCCATT CCGCCCGACG ATGAAGCCGA AAGCTGTTTC GGAGGAAAAT GCTGAGAAAA CTGTTTCGGA AACGCCTGCT GAACCAGCAG AGAAACCGGT TGCAGCGAAA CCTCCATTCC GCCCGACGAT GAAGCCGAAA GTGGTTGCCG ATGATAATGC GGAGAAACCA GTTGCCGAGG CTCCTGCTAA ACCGGCAGAG AAGCCGGTTG CTGCGAAAAC TCCATTCCGC CTGACGATGA AGCCGAAAGC TGTTTTGGAG GAAAATGCAG AGAAACCGGT TGAAGAAGCG CCTGCTGAAC CAATAGAGAG ACCGGTTGCT GCCAAACCTG CGTTTCGCCC AACTATGAAG CCGAAAGTGG TTGCAGAAAA TAATGCGGAA AAGCCCGTTG CCGAAGTGCC TGCCGAGCCA GCTGAAAAAC CAGTTGCAGA AGCCCCGGCA GAACCAGCAG AGAAACCAGC TGCGGCAAAA CCGGCATTTC GCCCCACAAT GAAACCCAAA CCCAAGGAAT AG
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Protein sequence | MSEYFKNISD GISTTLTGMR LTLRHLWNAR KSRKPADIRS SSFYDQQDGI VTIQYPQETI PIPDNGRYRL HNEMDDCIVC DKCAKVCPVD CIDIEPIKAV EDVGRASDGS PIRLYAAKFD IDMAKCCYCG LCTTVCPTEC LTMTKTFDYS ELDVRDMVYN YSNLTTEQAD EKRMLLEQFQ KEKEALKAAK AATPAAAASA GAAPATTAPA RPVFKPTAKP KPAEEPASET ASQEPAAPTP KPAFKPVMKP KKAEENTPAV DPAPTEKPTA GKPVFRPTLK PKVVSEENAE KPVAETPAEP AEKPVAAKPP FRPTMKPKAA SEENAEKPVA ETPAEPAEKP VAAKPPFRPT MKPKAVSEEN AEKTVSETPA EPAEKPVAAK PPFRPTMKPK VVADDNAEKP VAEAPAKPAE KPVAAKTPFR LTMKPKAVLE ENAEKPVEEA PAEPIERPVA AKPAFRPTMK PKVVAENNAE KPVAEVPAEP AEKPVAEAPA EPAEKPAAAK PAFRPTMKPK PKE
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