Gene Dfer_4031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4031 
Symbol 
ID8227629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4880565 
End bp4881695 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content48% 
IMG OID644931874 
ProductRedoxin domain protein 
Protein accessionYP_003088399 
Protein GI255037778 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0957968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA AACGGTTTGA TCCCGACTTT TTTAGGATTA TCGAGTTGCT TTTGATGATT 
GGTCTATTGT CCGCGTGCGG AGAGACGAGT GAAATAGTCG TTCGTGGCGA TCTGCGGGGG
GCCGATACGT TTCTGGAAGG GAAGCGGATC TTCCTGGAAA ATGCAGAAAC GCGCTACTTT
GTAGATACAA CCGTAGTGCG CGATGGACAA TTCGAATTCC AAATCGACAC GCAAAAGGAC
TTTATCCCCT TCCGTGCGGC CATCTATTTT GAAACCGGGA ATCCCGAATG GCCGCGTCAG
TTGATTGGTT ATCGAAACCC CTATTTTATG AAGACCGGCG AGGTGAATTT TTATGCGGAA
AGAGGTCTGA TGGAGCTTCA ATTGGATACA ATCCGCGTAT TTACACCAAA AAATACGGAG
GTAATGTTCA ACATAAAGGA CGTTAATCGG CAAACCAGTA CGCTCTTTCA CCATTTTAGT
TTAAAAACCG GCGCCCAAAA TGTTGCCGCT AACCGAGCCT ACAATCGGTC GTTGGTCGAG
AGGCATCCTT ATTCGTTGGA TCTGCTGCGC AATTTGAATT TCAGGAAGGC GGCGCTCCAA
CCCGATGAAG CCAAAGAATT GCTCGCACTT TTCGATCCAC AGCTGCATAC GAACCCAGTT
TATATTACCC TGCAAAACTA TGCGATGCTC GAAAACAAAA CCGGCAAGGA TTTTCCCGCG
ACAGTCGCGT TGAAAACGGC AGACGACCGG CTTTACGACG AAGCGCTGCT AGATCCAACC
AAACATAATC TCATTGTTTT CTGGGCAAGC TGGTGCGGGC CTTGCAGGAT GGAAATTCCG
CAAATCAAAA AGCTTTACGA GCGCAGTAAT GCAAAGCTGA ATATCGTAAG CATATCTGTC
GATAAGGATC AGGGTGCCTG GAAGGGTGCG ATGCAGAAGG AGCAAATGCC CTGGAAGCAA
TTTCTGTTGC CCGCAGGCGA AACTTACGCG ATGCTGGACA AAAAGTACAA TCTGGAAACC
ATTCCCGTTT GGATGCTGCT CGATCACAAG GGCAAAATGA TCGAGCAGCA TGTGGGTTAC
GACACCGGCG AAAATGCGAT GGATTTAAAA GTGGCCAAGC TTTTGAAATG A
 
Protein sequence
MENKRFDPDF FRIIELLLMI GLLSACGETS EIVVRGDLRG ADTFLEGKRI FLENAETRYF 
VDTTVVRDGQ FEFQIDTQKD FIPFRAAIYF ETGNPEWPRQ LIGYRNPYFM KTGEVNFYAE
RGLMELQLDT IRVFTPKNTE VMFNIKDVNR QTSTLFHHFS LKTGAQNVAA NRAYNRSLVE
RHPYSLDLLR NLNFRKAALQ PDEAKELLAL FDPQLHTNPV YITLQNYAML ENKTGKDFPA
TVALKTADDR LYDEALLDPT KHNLIVFWAS WCGPCRMEIP QIKKLYERSN AKLNIVSISV
DKDQGAWKGA MQKEQMPWKQ FLLPAGETYA MLDKKYNLET IPVWMLLDHK GKMIEQHVGY
DTGENAMDLK VAKLLK