Gene Dfer_4012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4012 
Symbol 
ID8227608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4863374 
End bp4864183 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content49% 
IMG OID644931854 
Producthypothetical protein 
Protein accessionYP_003088381 
Protein GI255037760 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00869755 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGT TGATATATCT GTGGTTAGCG GTCAAAACGG TGTTCTGTAC CTGTCAGCCC 
GATCACAGAA CCAATGATTT TAAGAAAGTT AAATCGCATT ACAAAATTAG CAAAATAGGA
AAGCTTCCCG CGGTTGCTTC GGAAAGTTCA GGATTGGCGA AAGGAGCGCA ACACGGCACT
TTCTGGACCC ACAACGACAG CGGAGGCAGA CCGGAATTGT ACCTCTTCGC ACCCGACGGC
AAATTACTCG ATACAAAAGC CGTTCCCGAC GCCCGGAATG TCGATTGGGA GGACCTCACG
CAAGATACGG CCGGAAATTT CTACATCGGT GATTTCGGCA ATAATAACCT GAACCGGAAA
ACGCTCGATA TATATAAGTA TAATCCACAA CAAGCCCGTA CGGAGCGGAT TACCTTTCGC
TATGCAGGCC AGCCGGTGGA TTGCGAGGCT TTTTTTCACC ACCGCGACAG TCTTTTCCTT
TTTTCTAAAA ACCAGGGCAA GGACAATTGG GTGAAAATGT ACCGCCTCCC CGTCCAAAAA
GGCGAACACT CCCTGGTACC GTCCGACAGT ATCCGCATTA ACAGTCCGGT AACTTCCGCT
GCCATTAGTC CCGACGGTAA AACCTTCGCA TTGCTGACTT ATGGGAAAGT GCTGCTCTTC
GAAACTGCCG GCGGCAATGT CGATTTCAGC AAGCCAATGG GCTGTTTCCG CTTTTCGAGG
AAGCAAACTG AGGCCATCGA ATTTTTGAAC AATACCGATA TGGTGATGAC CAATGAGCAG
GGCGACGTCT ATCGGACTAC ATTTCGCTGA
 
Protein sequence
MNKLIYLWLA VKTVFCTCQP DHRTNDFKKV KSHYKISKIG KLPAVASESS GLAKGAQHGT 
FWTHNDSGGR PELYLFAPDG KLLDTKAVPD ARNVDWEDLT QDTAGNFYIG DFGNNNLNRK
TLDIYKYNPQ QARTERITFR YAGQPVDCEA FFHHRDSLFL FSKNQGKDNW VKMYRLPVQK
GEHSLVPSDS IRINSPVTSA AISPDGKTFA LLTYGKVLLF ETAGGNVDFS KPMGCFRFSR
KQTEAIEFLN NTDMVMTNEQ GDVYRTTFR