Gene Dfer_4004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4004 
Symbol 
ID8227600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4854093 
End bp4855889 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content48% 
IMG OID644931846 
Producthypothetical protein 
Protein accessionYP_003088373 
Protein GI255037752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATGTGA AAATTACCAA TCAGACGAAT AACACAATTG ATTTACAGTA TAATCTTGAT 
TACAGAGGTC AGGCTAATCC CGGATATTCT GGAAATCTCG CATCCTATCA ATATAGTGTT
CCCGGATCCT TTTTGATTCT TCAGAAAGCA TTCCTCTCAA ACGGGACGAT TGCATATAAA
TGTAATCGCG CAACCGTTTA CGACACCAGG GGAGTAACGG CTCAATACTC GTCCTGCGGA
GGTGGGAAAG TTGTATTGAC ATTGGTGGAT AACGTGGTTC TGAAAGCGTA CGACCAGGTC
GAAATCAAAT GGGGGGATGG CGAGACTTCG ATATGGAATA AAGGCGGGGC ATTGATTTTT
GAGCATAACT ATGCAAACGT GTCAAATGCT CCAACGGTAT CGATAACAGG TTTATATGCG
GCAGGAAAGC CATGTGCCAA GGGAATTACC GCCAACCTGC CAATAAGTTT TGAAAGACCT
CAACTAAATG CAATCCAAAT GTCGAGCGTG GAGATGAGGG GAGATGGAAC GATTCGTTTG
ATTTACCTCG GAGTGGCGGG TATTCCAACG CAGATTCAAT TCAGTTCTGA TGGAACCAAT
TTTGCTGCGC ATGGCACGAG GTCGTCCGGC GGTACGCAGC CTTACGATAT CAAAGGCCAG
AACACCGCAC AAGTTTACAA AGTGAGGCTA TCCTCAGAAG ATCTTTGTGC AGGAAGCACG
CTCACACAGC CACTGAGCAC CATGACTCTC TCGGGAACTT CCACTGACGG TGCAAATAAT
CTGAAATGGA ATCAATATCC CGATGCAGCG CAGTTTGAGG GCTACGATTT GCTACGCGAT
GGCAATGTTA TCAAAAGCTT CACTTCACTC GGAGAAACAT CTTACACCGA TTCGGATGTG
GAATGCGGAA CGTTTACTGA ATATCAAATA GTAGCGAAAT TAAAGAACGC CACTTCCACC
TCTGCTCCCG TAGGTCTAAG AGTGGAAACA GGCAGTGCAA AGCCACTTGC GGGGGGCTCT
GTGTCGGTTC TTGATGCGAG CAGCATTGCT ATTAAGGCGG ATGTTCCCGG AGCCGGGCCC
AACACGACGT TTCAATTATC GATCGAACGC GCCGAGGCTG GCAGCACATT GTTTAAGAAG
ATCATCACGC TTTACAATCA GAGCGAGTAC ATCGACGATG CTGCTAAAAC CAGCGAACTT
TCCTACTGCT ACCGCATGAG CTACGAAAAC TCCTGCGGCC AGAAAGTGCC GGCCTCCGAA
CCGATCTGCA CTATTCTGCT CAGTAAAAAT CTGACAACCC TTAACTGGAC GGGGGAAAAC
CCGATCCTCG GCGGCACGGA AGGTTACACG GTCGTCCAGA CCGGGTCGAG TGGTAATTCG
GAGGACATTC CGGTGCAAAA GAGCACGAGC TACACCGTGA AGCTCAATAA CCAAAGCGAC
CTGGAATATA ATTTTCTGAT TAAGGCAACG TCGCAGGATG GCGATTTTGA AAGTTTGTCC
AATATTGTCA ACTACCGGCG CAATGCAGGC GTGTTTGTCC CCGATGCTTT TACGCCCAAT
GGAGACGGTT TTAACGATAT TCTCGAAGCC AAATCGGAGC AATTGCAGTC TTTCAAATTT
TCGGTCATGA ACCGTTGGGG CGTGGTCGTT TTCCATTCCG ATGACATTGC GAAAGGCTGG
GACGGAACCG TTGATGGGAC CAATGCGCCG GTGGGTTATT ACTTCTACAA GATGACTTTC
GTCGACGACA TCAATCAAAC TGTTGAAAAA AGCGGTACTT TTATGCTTTT ACGGTGA
 
Protein sequence
MNVKITNQTN NTIDLQYNLD YRGQANPGYS GNLASYQYSV PGSFLILQKA FLSNGTIAYK 
CNRATVYDTR GVTAQYSSCG GGKVVLTLVD NVVLKAYDQV EIKWGDGETS IWNKGGALIF
EHNYANVSNA PTVSITGLYA AGKPCAKGIT ANLPISFERP QLNAIQMSSV EMRGDGTIRL
IYLGVAGIPT QIQFSSDGTN FAAHGTRSSG GTQPYDIKGQ NTAQVYKVRL SSEDLCAGST
LTQPLSTMTL SGTSTDGANN LKWNQYPDAA QFEGYDLLRD GNVIKSFTSL GETSYTDSDV
ECGTFTEYQI VAKLKNATST SAPVGLRVET GSAKPLAGGS VSVLDASSIA IKADVPGAGP
NTTFQLSIER AEAGSTLFKK IITLYNQSEY IDDAAKTSEL SYCYRMSYEN SCGQKVPASE
PICTILLSKN LTTLNWTGEN PILGGTEGYT VVQTGSSGNS EDIPVQKSTS YTVKLNNQSD
LEYNFLIKAT SQDGDFESLS NIVNYRRNAG VFVPDAFTPN GDGFNDILEA KSEQLQSFKF
SVMNRWGVVV FHSDDIAKGW DGTVDGTNAP VGYYFYKMTF VDDINQTVEK SGTFMLLR