Gene Dfer_3991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3991 
Symbol 
ID8227587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4840164 
End bp4840958 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content51% 
IMG OID644931833 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003088360 
Protein GI255037739 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0793051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.868422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACC ATTTTTCCAA AAACTTACCG TACACCCAAC TAGGCTCCGG CCCTCATATT 
CTCCTCGCTT TCCACGGAAT TGGGCAAGAT GGCTCCTCAT GCTTCGCGCC AATGCTCAAA
TCGCTCGGTC AGCACTACAC CATCTACGCA TTCGATCTGC CATTTCACGG CCAAAACAGT
GACGCTCCGT TTGAAGTCAT TTCAAAAACA GCCTGGAAGG TCAGTATTCA ATCTTATCTG
AGTCAAAACA ACATTTCCCG CTTCGATATC GCCGGTTTCA GCATCGGCGG GCGGTTTGCA
TTGGCCACGC TGGAAGCATT TCCTGAACAA ATCGACAATG CATTCCTCAT TGCGCCCGAC
GGCGTAACGG AGCACCCGAT GTTCGCGCTG GCGACGCGCA TTCCGCCTGC GCGATGGATT
TATGGCTGGC TAATGCGGCA TCCCAATGTG TTTTTTCCCG GTGTACAGGC GGCGCGGACG
TTGAAACTGG CGAGTAAAAG TCTCGTACGG TTCACGCAGC AGGTTTTGAA TACCCCTGAA
AAACGGCAGA CCATTTACCG TTCATGGGTT GCATTCCGGG ATTTGCGGTT TGATATTCCG
GCATTGGTGA AGGTGGCTAA CGCTCATCAG GTGACGATTT ACCTTTTTGC GGGCGAATAC
GATAGTCTGC TGAAACCGAA GGCAGTCAAA AAGTTGGCCG ATCTGCTTCC CGAGAATCAA
TATATAGAAC TTAAAAGCGG CCATACCCGC CTGGTGGAAC ATGCGGCTGC GTGGATTTGC
ACTTTATTTA AGTAA
 
Protein sequence
MSDHFSKNLP YTQLGSGPHI LLAFHGIGQD GSSCFAPMLK SLGQHYTIYA FDLPFHGQNS 
DAPFEVISKT AWKVSIQSYL SQNNISRFDI AGFSIGGRFA LATLEAFPEQ IDNAFLIAPD
GVTEHPMFAL ATRIPPARWI YGWLMRHPNV FFPGVQAART LKLASKSLVR FTQQVLNTPE
KRQTIYRSWV AFRDLRFDIP ALVKVANAHQ VTIYLFAGEY DSLLKPKAVK KLADLLPENQ
YIELKSGHTR LVEHAAAWIC TLFK