| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3980 |
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| Symbol | |
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| ID | 8227576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4830736 |
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| End bp | 4831389 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931822 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_003088349 |
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| Protein GI | 255037728 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00414076 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.398554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGCTTC GATTGTTGAA AGAGCTGGTT AAGAAAGGTG AGGGGGAACA TCTGGAATTC
AAACTGAAAT CCAATCATCC CGAGAAGATC GTCCGCGAAG TGGTTGCTTT CGCAAATTCA
GGTGGCGGTA AGCTGCTGGT CGGAGTGGGT GACGACAAGA CCATCAAAGG TCTGAAAGAT
GCCGATGAGG ATGAATACAC CCTCACCCGT GCCATCGACA AGTTTATTTT CCCCAAAATC
AGTTTTAAAA AGGAACGCGT GGCCATTACG CCCGACCGTG ATGTGCTCGT GCTTACGATC
CCGCGGAGCG TCGACAAACC GCATTATGTG GTGGACGACA CCGGCGCGCG CCAGGCGTAC
ATACGCGTGG ACGACAAGTC CATCCAGGCC AGCCGCGAAA TGAAGGAAAT TATGCGCCGC
GGCCGGGGCG AGCGCGACGT CAGTTTTCAG TACGGTGAAA AGGAAGAAAA GCTCATGAAG
CTGCTCGATG AAAAGGAGTC GGTGACGGTG GATTTGTTCG CAGCATTCGC CGGCATTCCC
CGTAAAATTG CTTCTAATAC GCTGGTAGTG ATGGTTTTGG CAAGAATCCT GGAAGTGCAT
CCGCACGAAA TGATCGACAA GTTCACGATG TCGATGGCTT ACCAGTCGAA CTGA
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| Protein sequence | MELRLLKELV KKGEGEHLEF KLKSNHPEKI VREVVAFANS GGGKLLVGVG DDKTIKGLKD
ADEDEYTLTR AIDKFIFPKI SFKKERVAIT PDRDVLVLTI PRSVDKPHYV VDDTGARQAY
IRVDDKSIQA SREMKEIMRR GRGERDVSFQ YGEKEEKLMK LLDEKESVTV DLFAAFAGIP
RKIASNTLVV MVLARILEVH PHEMIDKFTM SMAYQSN
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