Gene Dfer_3977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3977 
Symbol 
ID8227573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4829489 
End bp4829785 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content44% 
IMG OID644931819 
Producthypothetical protein 
Protein accessionYP_003088346 
Protein GI255037725 
COG category[S] Function unknown 
COG ID[COG4680] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.115023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.26134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATTA TTACCCGTGG TAGCCTGCGC GATTTTTGGG AAAAGCATCC CGATGCAGAA 
CAGGAACTGA AATATTGGTA TGAAAAGATG AAGCGATCCG AGTACCAGAC TGCAAATGAG
GTGGTTGTCG ATAATCCCAG GACTGATACG GTGGGGAATA ATCGGATCGT CTTCAATATT
TGCAGGAACC GCTATCGCCT GATAGCATTG TTCAGATCCC GATTGCAGCG CGTATACATT
CGTTTTATTG GCACACACAA AGAATATGAC CGGATCACTG ATATCAGGAA TATATAA
 
Protein sequence
MRIITRGSLR DFWEKHPDAE QELKYWYEKM KRSEYQTANE VVVDNPRTDT VGNNRIVFNI 
CRNRYRLIAL FRSRLQRVYI RFIGTHKEYD RITDIRNI