Gene Dfer_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3976 
Symbol 
ID8227572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4828619 
End bp4829350 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content56% 
IMG OID644931818 
ProductCutC family protein 
Protein accessionYP_003088345 
Protein GI255037724 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3142] Uncharacterized protein involved in copper resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.568122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.298928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTG AAATTTGCGC TTATTCGCTG GAATCCTGTA TCAATGCGCA GGCCGGCGGG 
GCGGGCAGGA TTGAATTATG CGGCGGGCTC GGTGAAGGTG GGACCACGCC CAGTGCCGGT
CTCATTGAAA TCGTAAGAAA ACACGTCGAC ATTCCTATAT ATGTGATGAT CAGGCCGCGC
GGCGGTGATT TTGTGTATGA TTTTTTCGAG GAGGAGATCA TGCGGAAAGA CATTGATCTG
GCCAAAAAAC TGGGCGCAAA CGGCGTCGTG CTGGGCATTC TCACGCCCGA CGGTAATGTG
GACGTGGCGC GCACAAAGGC GCTCGTCGAC TATGCGGCGC CATTGAAAGT GACTTTCCAC
CGGGCGTTCG ACCTTACGCC CGATCCGATG AAAGCATTGA AGGATGTGAT CGCCACCGGC
GCCGAGCGTA TCCTCACCTC CGGCCAGAAA CCGTCGGCCA TTCAGGCGAC GGAATTGCTC
GGTAAACTGG CCAAAGAAGC AGATGGAAAA ATCGAGATCA TGGCCGGAGG CGGCGTAAAC
CATAACAATG CGGCCGAACT GAAAACAGCT GGCGTGCATT CGCTGCATAT GACGGCCAAG
AAGTTCCGGC CGGCGCGGCA GAAGTTTTTC CCGGAAGGTA TTTCCATGGC AGGCGAAATC
CCGGACGAGA AGTCGGTGAT GTATTCCGAT CTCGGACTGA TCGAGGCGAT GGTGCAGGCA
GTCGCCGAGT AA
 
Protein sequence
MTIEICAYSL ESCINAQAGG AGRIELCGGL GEGGTTPSAG LIEIVRKHVD IPIYVMIRPR 
GGDFVYDFFE EEIMRKDIDL AKKLGANGVV LGILTPDGNV DVARTKALVD YAAPLKVTFH
RAFDLTPDPM KALKDVIATG AERILTSGQK PSAIQATELL GKLAKEADGK IEIMAGGGVN
HNNAAELKTA GVHSLHMTAK KFRPARQKFF PEGISMAGEI PDEKSVMYSD LGLIEAMVQA
VAE