Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3975 |
Symbol | |
ID | 8227571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4826125 |
End bp | 4828581 |
Gene Length | 2457 bp |
Protein Length | 818 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644931817 |
Product | peptidase S45 penicillin amidase |
Protein accession | YP_003088344 |
Protein GI | 255037723 |
COG category | [R] General function prediction only |
COG ID | [COG2366] Protein related to penicillin acylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.622551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTG TAAAGGCAAT TTTATTCATC GCGATCACCG CAGGGCTCGT TTATGTGCTC GACAGACGCT GGGACCCCGC TCCCGCGATG GGGCCGTTTC TCAGCCCGTT TTGCGGACTT TGGCAGAACA GCGAGAAAGT CAAGGACCCT AAAACCAAAG TGGTGCTGCA ACTCGACAGC CTGCACGACG AGGTGACCAT CCGTTTCGAC GAATACGGCG TACCGCATAT TTTTGCCAAA AACGACTTCG ATCTTTTCTA CGCGCAAGGT TACATCACCG CCAAGGACCG GCTTTGGCAA ATGGACCTCC AGACACGCGC TGCGGCCGGC CGACTTTCTG AAATCCTCGG TCCGGCCACC CTGCCGATGG ACCAGCAAAG CCGCAGGCTC GGAATGGGCT ACGGCGCCGA GGCAAACCTG AAAGTGGCGA TGACCGACCC GCGTTCGCGA GAGGCGTTAC TCGGCTACAC CGCCGGCGTG AATGCATTCA TCCGGCAGCT CGACCCGAAA GATTACCCCA TTGAATTCAA ACTTTTGGGA TACAAACCCG AGGCCTGGAA GCCGATTAAC ACCATGTACA TGCTCGAACA AATGACGCTC ACACTAGCCG GGCGTTCCAA CGAGCAGGCC ATGACCAATG CATTGAAAAA GTACGGGCAG GAAACCATCG CCCAGCTCTT CCCCGACTAC CCGTTGTTGC AGGAAAGCCC GATTATTCCG TCCGGCACCG CCTGGAACTT CCCCAAACTT CCCGTTCCCA AGTCCGTGCC GCCGATGATA CCGGGCGATA GCGTCGCATT ATCCGCAAAA CCTTTGACCG CATTGCCGCC CCGTGCGCCC AAAGAGGAAG GCATTGGCAG CAACAACTGG GCCGTGAGTG CCGAAAAGTC CATTACGGGC TACCCTATTC TGGCCAACGA CCCGCACCTC GAACTATCGC TCCCGTCGAT CTGGTACCAG GTGCAGCTGC ATTCGCCGGA TGTGAATGTG TACGGCGTGT CGCTGCCGGG CATTCCGAGT GTGATCATCG GCTTCAACCA GCATGTGGCG TGGGGCGTTA CCAATGTAGA TGCCGATGTT TTTGATTTAT ATAAAATCAA GTTCAAAAAT GAATACCGGA ACTTCTATTG GCATGATAAT CAATGGAAAC CAACCCACAA GCGTGAAGAA ATTATCCATG TGAAAGGTCA GCTGAGGCCC TATCGCGAGC AAATCATTTA CACCCACCAC GGGCCAGTCA CCGATTCGGA CGGCACATTT GGGGATTTGC CCAACCTGGC TATTAAATGG ATCGGCCATG AGCCGGGCAA CAGTTTCATT ACCTTTTATG AGTTAAACAA GGCCAAAACC TCCGACGACT ACCGCAAGGC CCTCACGCAT TATGTAGGAC CTGCGCAGAA TTTCGTGTTT GCGGATAATG AGAAGAACAT TGCCATTACC GTAAATGGAA AAATCCCTTT GAAATATAAG GAACAGGGCA AATTTGTGCT CGATGGCTCG TTGCCGGCCA ACGACTGGCA GGGCTGGATT CCCGCGGAGC AGAATCCGTT CGTAAAAAAC CCACCGCGCG GTTTTGTAAG CAGCGCCAAC CAATCATCGG CCGACACCAC TTATCCTTAT TATATCAATT GGAGCTTCGC GCCGCCCGAG CGCGCCATCC GCATCAATGA GCGCCTCCAA GCGATGAACA GCGCCAATGC CGATAGCCTC AGAATGCTCC AAAACGACAA TTTCAGCGTG TTGGCGCGCA CATTACTTCC CAAATTGCTC GGCATTCTCG AAACGCGCCC GCTGAGCCCG AAGCAGAAGG CCGCCCGTAT CCTGCTTTCA AACTGGAATT ATCAGAACTC CCCGGAATCC ATCGCCGCGT CTATCTTCGA AACCTGGTTT CCACTGCTAG GCCAGGCCAT CTGGAGCGAC GATTTTTCCT CTGCCGAAAG CCCGATGGAA TATCCCTCGC GCGACCGGAC GCTTTACCTG ATCTTAAAAC AGCCGAACGA AAAGTGGTTC GATAACGTGA ACACGCCCGA GAAAGAGACA TTACCCGACC TGGTGTACCA GAGCTTCAAT GCCTCGCTTG ATACGCTCAC TGCCCGCAAG GGCGCTATGA GCCCTGAGTG GCAATGGTCG AAGGTGAAAG ATGCCGAAAT AAGGCATTTG AGCCGCAGCA TTAAACCCTT CAACGCGCCA CCGCTGTTAA CCGGCGGCGG CAGCAGCATT GTGAATGCCA TGACGAAGCG AAAGGGGCCA TCCTGGCGGA TGGTGGTGGA ACTGGGGCCG ACGCCCCGGG CGTATGGCAT CTTCCCGGGC GGTCAGTCAG GAAATCCGGG TAGCCCTTAT TACCTCAATT TGCTGGAAAA GTGGGAGAAA GGCGAGCTGA ATGAGTTAAT CTACCTCACA TCGCCCGACC AGAAAGTGCC GCGTCTCGCG TCGAGTCTTG TATTGCAAAA ACGTTAA
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Protein sequence | MKFVKAILFI AITAGLVYVL DRRWDPAPAM GPFLSPFCGL WQNSEKVKDP KTKVVLQLDS LHDEVTIRFD EYGVPHIFAK NDFDLFYAQG YITAKDRLWQ MDLQTRAAAG RLSEILGPAT LPMDQQSRRL GMGYGAEANL KVAMTDPRSR EALLGYTAGV NAFIRQLDPK DYPIEFKLLG YKPEAWKPIN TMYMLEQMTL TLAGRSNEQA MTNALKKYGQ ETIAQLFPDY PLLQESPIIP SGTAWNFPKL PVPKSVPPMI PGDSVALSAK PLTALPPRAP KEEGIGSNNW AVSAEKSITG YPILANDPHL ELSLPSIWYQ VQLHSPDVNV YGVSLPGIPS VIIGFNQHVA WGVTNVDADV FDLYKIKFKN EYRNFYWHDN QWKPTHKREE IIHVKGQLRP YREQIIYTHH GPVTDSDGTF GDLPNLAIKW IGHEPGNSFI TFYELNKAKT SDDYRKALTH YVGPAQNFVF ADNEKNIAIT VNGKIPLKYK EQGKFVLDGS LPANDWQGWI PAEQNPFVKN PPRGFVSSAN QSSADTTYPY YINWSFAPPE RAIRINERLQ AMNSANADSL RMLQNDNFSV LARTLLPKLL GILETRPLSP KQKAARILLS NWNYQNSPES IAASIFETWF PLLGQAIWSD DFSSAESPME YPSRDRTLYL ILKQPNEKWF DNVNTPEKET LPDLVYQSFN ASLDTLTARK GAMSPEWQWS KVKDAEIRHL SRSIKPFNAP PLLTGGGSSI VNAMTKRKGP SWRMVVELGP TPRAYGIFPG GQSGNPGSPY YLNLLEKWEK GELNELIYLT SPDQKVPRLA SSLVLQKR
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