Gene Dfer_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3972 
Symbol 
ID8227568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4824326 
End bp4824904 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content44% 
IMG OID644931814 
Productprotein of unknown function DUF820 
Protein accessionYP_003088341 
Protein GI255037720 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.307001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGG TAGAATTGAG ATACAAGCCT CTGCGTCTTG ATGATGAATT CTACGAGTTT 
TGCCGGGAGA ATGATCAACT CAAAATAGAG AGGGATAGCG AAGGAACGCT CTATATTATT
TCAAATAGTG GCGGAACTAC GGGAATCTTG AATTCGATCA TCAACTACTG GCTGATGCAT
TGGCACCTTG CGAGGAATTT GGGCCATGTT TTTGATTCAT CGACAGCTTT TCGTCTTCCT
AACACCTCGG TAAGATCTCC TGACGCCTCG TGGGTCTCCA ATGAAAAATG GGAATACCTG
ACGGACGCCG AACAAACAAA GTTTCCACCT GTTTGTCCTG ACTTTGTGAT TGAGTTGCTA
TCAGCAAATG ATGATTTACA CACCATTCAG AAAAAGATTC AAAGCGAATG GATTGAAAAC
GGATGCAGCC TGGCTTGGCT TATCGATCCA TTTACAGAGA CAGCTTATGT GTATCGACCG
AATGCGGATG TCGAGGCTGT CAGCGGATTC AGCCAGCTAT TATCGGGGGG AAACGTGCTT
GAAGGCTTTG AATTCGATTT AAGCAAACTC AAAATATAA
 
Protein sequence
MDTVELRYKP LRLDDEFYEF CRENDQLKIE RDSEGTLYII SNSGGTTGIL NSIINYWLMH 
WHLARNLGHV FDSSTAFRLP NTSVRSPDAS WVSNEKWEYL TDAEQTKFPP VCPDFVIELL
SANDDLHTIQ KKIQSEWIEN GCSLAWLIDP FTETAYVYRP NADVEAVSGF SQLLSGGNVL
EGFEFDLSKL KI