Gene Dfer_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3949 
Symbol 
ID8227544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4796666 
End bp4797769 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content52% 
IMG OID644931790 
Productglycosyl transferase group 1 
Protein accessionYP_003088318 
Protein GI255037697 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.256853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG TGTTGCTGAT CAGCACCGTG CATCCGGCGA CGGACTCGCG CATCATGTAC 
AAAATCGTCC CTTCGCTGCG TAGCGGCTAC GAGGTGTTTT GTGCATTGCC GCAGCTGTAT
GCCTCCGAAA AAAGGCTGAT CAGCCTGCCG CGGTTTGAAA GGCTGCTTCC CAGGTTACTT
TTTGCACATC CCGTGGCGTT GGTGAAATGC CTGATGCTGA GGCCGCACAT TGTCCACATT
TTCGTGCCCG AGCTCATTCC CCTGGCGCTC CTGTTTCAAT GCATTGGTGC GCGGGTGATT
TATGAAGTTC AGGAGAACCT GTTCAAGAAG TTTGCCATTA AAACTTATAA CAACAGTCTG
ATATTCAGGG TACTTTTCAA ATTCTTCGAT AAACTGGCGC GGAGGAAGTT CCATTGCATT
TTCACGGACG ATGCCTATCT CGAAGAATAT ACGGACCTGG CTAAATCTTC CGTCGTAATC
CATAACTATG TGTCATTGCC GGTGATCGAT GCGCTCGGAA ACGAGGCCGT GCCCGTGCAG
AGGCCGGAAT TTTTCTATTT GGGAGTTGTT TCGATGGAGC GTTGCCTCGA CACGATGATC
GAGGCGCTGG CCAGGCTGAA AAGCGGCTAC GCCGATTTCC ACCTGCATCT TTTCGGCCCG
GTGCGCGTGA GCAGCACCGC ATTGAAGAGC CTTCCGGGTT ATCAGCAGGT TGCCGGCCAT
ATCACATTCC ACGGTTACAC CGATCAGAAA ATTGCCATGC GTGTGGCCGC GCGGGCGGTG
GCGGGCATTG CCCTGCTGAA ACCAGTTGCG GATTATCCCG AATCGCTTCC GACGAAGCTG
TTCGAGTATA TGGCATTAAA ATTGCCGCTG ATTACCTCCG ACTTCCCATT ATACAAGCAA
ATTGTCGGGC AAGCCGCCTG CGGTTTCTGC ATTTCACCTT ACGACGCCGA CGCCCTGTGC
TACGCGCTCG AACAATGCAT GAATAATGGA AGTTTACGAC ACGAAATGGG CCGCAATGCG
CGGAAGGCAG CGGAAACGGT ATACAACTGG GCCTCGGAAG AAAAGCTGTT GCTGGCATTT
TACAACAACA TACTCATCAG TTAA
 
Protein sequence
MKRVLLISTV HPATDSRIMY KIVPSLRSGY EVFCALPQLY ASEKRLISLP RFERLLPRLL 
FAHPVALVKC LMLRPHIVHI FVPELIPLAL LFQCIGARVI YEVQENLFKK FAIKTYNNSL
IFRVLFKFFD KLARRKFHCI FTDDAYLEEY TDLAKSSVVI HNYVSLPVID ALGNEAVPVQ
RPEFFYLGVV SMERCLDTMI EALARLKSGY ADFHLHLFGP VRVSSTALKS LPGYQQVAGH
ITFHGYTDQK IAMRVAARAV AGIALLKPVA DYPESLPTKL FEYMALKLPL ITSDFPLYKQ
IVGQAACGFC ISPYDADALC YALEQCMNNG SLRHEMGRNA RKAAETVYNW ASEEKLLLAF
YNNILIS