| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3936 |
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| Symbol | |
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| ID | 8227531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4784944 |
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| End bp | 4785531 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931777 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_003088305 |
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| Protein GI | 255037684 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAATC CGCGTGTAAA CATTGCTTCC GAAGAAGTGC TTTCCAATAA CTGGTATACC
CTTCGCAAAT ACACATTCGA TTACCAGCGT GCCGACGGCT CCTGGGAGCG CCAGGCGCGC
GAGGCATACG ACCGTGGAAA CGGAGCGGTG ATACTGCTCT ATAATGCTGA AAAACAGACG
GTTGTGCTTA CGAGACAATT CCGGCTTCCT ACCTACACCA ATGGCAACGA AACCGGCATG
ATGATCGAAG CCTGCGCGGG GCTGCTTGAC AGGGACAATC CCGAGGAATG CATCAAGCGC
GAAACGGAGG AAGAAACAGG CTACAAAGTG AGCGCGGTGA AGAAAATTTT CGAAGCCTAT
ATGTCGCCCG GTTCGGTGAC CGAAATCCTC TACTTTTTCG TGGCCGAATA TTCCGACGAC
ATGAAGGTAG GCGACGGCGG CGGCTGCGCG ACCGAGCAGG AGAACATCGA AGTAATGGAA
ATTCCGTTCC GCGAGGCAAT TGACATGGTG GCGAGCGGGG AGATTAACGA CGCCAAAACG
ATCATGCTCA TTCAATATGC GCAGATCCAC GGCCTGGTAG GGCAATAG
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| Protein sequence | MANPRVNIAS EEVLSNNWYT LRKYTFDYQR ADGSWERQAR EAYDRGNGAV ILLYNAEKQT
VVLTRQFRLP TYTNGNETGM MIEACAGLLD RDNPEECIKR ETEEETGYKV SAVKKIFEAY
MSPGSVTEIL YFFVAEYSDD MKVGDGGGCA TEQENIEVME IPFREAIDMV ASGEINDAKT
IMLIQYAQIH GLVGQ
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