Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3922 |
Symbol | |
ID | 8227517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 4769440 |
End bp | 4770192 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644931763 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003088291 |
Protein GI | 255037670 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTA TTGCATTTAT TACCGGAGCT ACATCCGGTA TCGGTAAGGC CACGGCGGAA GCGTTCGCCG GTGCCGGAAT AGACCTTATT TTGTGCGGCC GCCGCCAGGA TCGTCTCGAC GAGATTGCAG CTGAACTCGC CCCGAAAGTG AAAGTAACGA CGCTCATTTT CGACGTTCGC GACAAAGGCG CCGTGCTCGC GGCGGTGGGT GCGCTGCCCG ACGAGTGGAA AAACATCGAT ATTCTGGTCA ACAATGCAGG CAATGCCCAC GGCCTGGGAA CACTCGACGA AGGCGATACC GACGACTGGG ACGCGATGAT CGACGGGAAT GTGAAGGGCC TACTGTATGT TTCCAAAGCC ATCATTCCGC TCCTGCTCGA ACGCGGCAAG GGCCATATTG TGAACATCAG CTCCATTGCC GGAAAGCAAA CTTATGTGAA CGGCGCCGTG TATTGTGCCT CGAAGGCGGC TGTGGAGGTG ATCAGCGAAG GAATGCGCCT TGAACTGACG CAACACGGCA TTAGAACTAC CAATGTGGCG CCCGGCGCGG TGGAAACCGA ATTCTCGCTG GTTCGCTTTA AAGGCGATGA GGAACGCGCC GATAAGGTGT ACCAGGGCTT CGAACCGTTA CAGCCCGGCG ACATCGCCGA CGCGATCCTT TACGCCGTGA ATGCGCCTGA CCGTGTTACG ATTGCAGATA TCACGATCCT CGCCGGAGCG CAGTCCACCG CCACCACCAT TCATAGGAAA TAG
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Protein sequence | MSRIAFITGA TSGIGKATAE AFAGAGIDLI LCGRRQDRLD EIAAELAPKV KVTTLIFDVR DKGAVLAAVG ALPDEWKNID ILVNNAGNAH GLGTLDEGDT DDWDAMIDGN VKGLLYVSKA IIPLLLERGK GHIVNISSIA GKQTYVNGAV YCASKAAVEV ISEGMRLELT QHGIRTTNVA PGAVETEFSL VRFKGDEERA DKVYQGFEPL QPGDIADAIL YAVNAPDRVT IADITILAGA QSTATTIHRK
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