Gene Dfer_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3922 
Symbol 
ID8227517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4769440 
End bp4770192 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content57% 
IMG OID644931763 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003088291 
Protein GI255037670 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTA TTGCATTTAT TACCGGAGCT ACATCCGGTA TCGGTAAGGC CACGGCGGAA 
GCGTTCGCCG GTGCCGGAAT AGACCTTATT TTGTGCGGCC GCCGCCAGGA TCGTCTCGAC
GAGATTGCAG CTGAACTCGC CCCGAAAGTG AAAGTAACGA CGCTCATTTT CGACGTTCGC
GACAAAGGCG CCGTGCTCGC GGCGGTGGGT GCGCTGCCCG ACGAGTGGAA AAACATCGAT
ATTCTGGTCA ACAATGCAGG CAATGCCCAC GGCCTGGGAA CACTCGACGA AGGCGATACC
GACGACTGGG ACGCGATGAT CGACGGGAAT GTGAAGGGCC TACTGTATGT TTCCAAAGCC
ATCATTCCGC TCCTGCTCGA ACGCGGCAAG GGCCATATTG TGAACATCAG CTCCATTGCC
GGAAAGCAAA CTTATGTGAA CGGCGCCGTG TATTGTGCCT CGAAGGCGGC TGTGGAGGTG
ATCAGCGAAG GAATGCGCCT TGAACTGACG CAACACGGCA TTAGAACTAC CAATGTGGCG
CCCGGCGCGG TGGAAACCGA ATTCTCGCTG GTTCGCTTTA AAGGCGATGA GGAACGCGCC
GATAAGGTGT ACCAGGGCTT CGAACCGTTA CAGCCCGGCG ACATCGCCGA CGCGATCCTT
TACGCCGTGA ATGCGCCTGA CCGTGTTACG ATTGCAGATA TCACGATCCT CGCCGGAGCG
CAGTCCACCG CCACCACCAT TCATAGGAAA TAG
 
Protein sequence
MSRIAFITGA TSGIGKATAE AFAGAGIDLI LCGRRQDRLD EIAAELAPKV KVTTLIFDVR 
DKGAVLAAVG ALPDEWKNID ILVNNAGNAH GLGTLDEGDT DDWDAMIDGN VKGLLYVSKA
IIPLLLERGK GHIVNISSIA GKQTYVNGAV YCASKAAVEV ISEGMRLELT QHGIRTTNVA
PGAVETEFSL VRFKGDEERA DKVYQGFEPL QPGDIADAIL YAVNAPDRVT IADITILAGA
QSTATTIHRK