| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3920 |
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| Symbol | |
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| ID | 8227515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4765639 |
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| End bp | 4767588 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931761 |
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| Product | acetoacetyl-CoA synthase |
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| Protein accession | YP_003088289 |
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| Protein GI | 255037668 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTTG AGGCGCAGGC GCAACCGTTG TGGAAGCCGG GGAGGGCTCT TTTGGAACAG
TCCAATCTGA AAAAGTATAT GGATTGGCTG TTTGTCAAAA AAGGCCTTTA TTTCCGGTCG
TATCATGATT TGTGGGAATG GTCGGTGACC GACCTGGAAG ATTTCTGGGA AAGCCTCTGG
AATTATTTCA ATATCAAATC GCACGACCTC TACCTGGAAG TGCTGCAAAA GCCGCTGAAC
GGACTGATCG GCACCCGGTG GTTTACCCGG TCGAAACTGA ACTACGCCGA ACATATTTTC
AGGAACAGAA CGAAGGACCG TCCGGCGCTC ATTTTTCAAT CGGAGCGGTC GGAACTTGTG
GAGATTTCCT GGGAAACGCT GGAAGCGCAG GTGGCAGCCG TTTCTACCTG GCTGAAACAG
CGGGGCGTAA GGCCGGGCGA CCGTGTTGCG GCCGTACTTC CGAATATTCC GCAGGCTGTG
GTCGCATTCC TGGCGACGAA CGCGGTAGGG GCCGTCTGGT CGTCCTGTTC GCCCGATTTC
GGCAAACCCG CCATTACCGA ACGGTTCGCG CAAATCGAGC CGAAGGTGCT GTTCACCGTG
GACGGGTATG TTTATAATGG CAAAACCTAC GACATTACCT CGTTCGCCGG AGAGCTTTCC
GCCGCGCTGC CCAGCGTTGG CGACACGGTT TTGATCGACA ATATTTTTTC AGAAACCCGC
CCCGACCGAT TTACGGCCTG GGAAGACATT CTGCATTTCG AAAACTTCGG GATCGATTTC
GAGCCTGTAC CGTTCGATCA CCCGATCTGG ATACTCTATT CGTCGGGAAC CACCGCCAAG
CCGAAAGCCA TTACCCACAG CGTAGGCGGC TGCCTCATCG AGCATATGAA AGCATTGGTG
CTGCACCAGA ACGTGAAACC GGGCGACCGG TATTTCTGGT ATTCCACCAC CGGCTGGATG
ATGTGGAACT ACGCATTGAG CTCGCTGCTT TGCGGTGCCA CGCTGGTAAT GTACGACGGT
GCGCCGGCCT ACCCATCGTC ACAAATGCTC TGGACTTTGG TTGAAAAGGC CAAAATCACG
CATTTTGGCA GCGGGGCGGC ATTTTTTATC GCGTCCATGA AAAGCGGCGT AAGCATTACC
TCTGAGCGGC TGGGCCATCT GGAAACGATC GGCTCCACCG GGTCGCCGCT CCCGCCGGAG
ACTTTTGAAT GGATTTATAA GCAGGTCAAA AAGGATGTGT GGCTGATTTC GCTCAGCGGG
GGTACGGACG TATGCAGCGC ATTTGTAGGC GGGTGCCCGC TTCTGCCCGT GTATGCAGGC
GAAATCCAAT GCCGGATGCT CGGAGCGAAG ATCGAGGCCT TCGACGAGCA GGGCCAGCCC
GTCTTGAACG AACTGGGCGA AATGGTGATT ACGCAGCCCA TGCCGTCCAT GCCGATTTAT
TTCTGGAACG ACTACCATCA CGAAAAATAC CTTTCCAGCT ATTTCGAAAT GTACCCGCAC
GTGTGGCGCC ATGGCGACTG GATTAAAGTT ACGGACCGGA AATCGGTGAT CATTTACGGC
CGGTCCGATG CCACGCTCAA CCGCGGCGGG GTCCGCATTG GCACCGCCGA GATTTACCGG
GCGGTGGAGA GCATCCCCGA TGTAAAAGAC AGCCTGGCCG TTTATCTCGA AAAATCGAAC
GGCGAGGGCA CGATATCGCT GTTTGTCGTC CTTGCCAAAG ACAAGGAACT GACCGACGAA
CTCAAAACGC AGATTAAGGA TACATTACGC ACCCAATACA GCCCGCGCCA CGTGCCCGAC
ACCATCGAGC AGGTTGGCGA CATTCCTTAC ACAATCAACG GAAAAAAGAT GGAAGCGCCG
ATGAAGCGGA TACTCATGGG GCAAGACCCG GCGAAGTGCA TCAACATTGA CACGATGCGG
AATCCCGAGT CATTAAAAGC ATTCATCTAG
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| Protein sequence | MSVEAQAQPL WKPGRALLEQ SNLKKYMDWL FVKKGLYFRS YHDLWEWSVT DLEDFWESLW
NYFNIKSHDL YLEVLQKPLN GLIGTRWFTR SKLNYAEHIF RNRTKDRPAL IFQSERSELV
EISWETLEAQ VAAVSTWLKQ RGVRPGDRVA AVLPNIPQAV VAFLATNAVG AVWSSCSPDF
GKPAITERFA QIEPKVLFTV DGYVYNGKTY DITSFAGELS AALPSVGDTV LIDNIFSETR
PDRFTAWEDI LHFENFGIDF EPVPFDHPIW ILYSSGTTAK PKAITHSVGG CLIEHMKALV
LHQNVKPGDR YFWYSTTGWM MWNYALSSLL CGATLVMYDG APAYPSSQML WTLVEKAKIT
HFGSGAAFFI ASMKSGVSIT SERLGHLETI GSTGSPLPPE TFEWIYKQVK KDVWLISLSG
GTDVCSAFVG GCPLLPVYAG EIQCRMLGAK IEAFDEQGQP VLNELGEMVI TQPMPSMPIY
FWNDYHHEKY LSSYFEMYPH VWRHGDWIKV TDRKSVIIYG RSDATLNRGG VRIGTAEIYR
AVESIPDVKD SLAVYLEKSN GEGTISLFVV LAKDKELTDE LKTQIKDTLR TQYSPRHVPD
TIEQVGDIPY TINGKKMEAP MKRILMGQDP AKCINIDTMR NPESLKAFI
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