| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3913 |
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| Symbol | |
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| ID | 8227508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4757856 |
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| End bp | 4758668 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931754 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_003088282 |
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| Protein GI | 255037661 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGA TACCGAAGCT GAAAAATACC GATTCGACCT CCTTTTTCCT GATGGCCGGC
CCCTGTGCGA TCGAAGGACG GGACATGGCC CTGCGGATCG CCGAACATAT CGTTACGGTT
ACCGACCGCC TGCGCATTCC TTATATATTC AAAGGCTCCT ACCGCAAAGC CAACCGCACC
AAAATCGACT CATTTACGGG TATTGGCGAT GAAAAAGCAC TGAAAATCTT GCAGGAAGTA
AGTCAGACTT TCGGCATTCC TACTGTAACC GACATCCACG AATCGCACGA GGCCGCGTTG
GCTGCGGAGT ATGTGGACGT GCTCCAAATC CCTGCATTCC TCTGCCGCCA GACCGAATTA
CTGGCCGCCG CCGCACGCAC GGGCAAGGCG GTGAATGTAA AAAAGGGGCA ATTTCTTTCC
GGTGCATCAA TGAAATTTGC CGCTGAAAAA ATCAATGAGG TAAATCCGGA CGCACAGGTA
ATCCTCACCG ACCGCGGTAA CAGCTTCGGC TACGGCGACC TGGTGGTGGA TTATCGCAAC
CTGCCGGAAA TGGCTGCATT CGGCGTGCCG GTGGTAATGG ATTGCACGCA TTCATTGCAG
CAGCCCAATC AAACATCCGG CGTAACCGGC GGCAAACCGA AACTGATCGA AACGATTGCC
AAAGCCGCCA TTGCAGTGGG CGCGGACGGT CTTTTTATTG AAACCCATTT CAATCCCTCC
GAAGCCAAGT CCGACGGCGC CAATATGCTG CCGCTCGATC AGCTGGAAGG ACTACTGGAA
AGACTCGTAC GTGTGAGAGA AGCTATTTTA TGA
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| Protein sequence | MISIPKLKNT DSTSFFLMAG PCAIEGRDMA LRIAEHIVTV TDRLRIPYIF KGSYRKANRT
KIDSFTGIGD EKALKILQEV SQTFGIPTVT DIHESHEAAL AAEYVDVLQI PAFLCRQTEL
LAAAARTGKA VNVKKGQFLS GASMKFAAEK INEVNPDAQV ILTDRGNSFG YGDLVVDYRN
LPEMAAFGVP VVMDCTHSLQ QPNQTSGVTG GKPKLIETIA KAAIAVGADG LFIETHFNPS
EAKSDGANML PLDQLEGLLE RLVRVREAIL
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