Gene Dfer_3910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3910 
Symbol 
ID8227505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4756071 
End bp4756616 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content50% 
IMG OID644931751 
Productmethyladenine glycosylase 
Protein accessionYP_003088279 
Protein GI255037658 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0771426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATATT GCACTTACGT CAACAACAAC CCGTCGGAGC AGGCTGATTA CCTGCTCCAC 
AAACATTACC ACGACCACCA ATACGGCTTC CCGATCGACG ACGACGACGA GCTTTTCGGG
AGACTGTTGC TGGAAATCAA CCAGGCCGGA CTAAGCTGGA CATTAATGCT CCGGAAGCAG
TACAGTTTCC GGTCGGCCTA CGACAATTTC TCCATTGAAA AAGTAGCCGC ATACGGCGAA
TCCGACCGCG AACGCCTGCT GGCCGACCCG GGCATTGTGC GTAACCGGCT GAAAGTGAAT
GCAGCCATCG TGAATGCGCA GAAAATTCTG GAATTGAAAC AGGAATACGG CTCATTCAAA
GGCTGGATCG ACGCGCATCA CCCTTTGACC AAGGAACAAT GGATCAAGCT TTTTAAGAAG
ACCTTTAAGT TTACCGGCGG AGAAATCGTG AATGAGTTTT TGATGAGTAC AGGCTATTTG
CCTGGCGCTC ACGATGCGGA TTGCCCGGTT TTTGCTCTTA CTAATGTCAC GCAAGCTCAC
AAATGA
 
Protein sequence
MSYCTYVNNN PSEQADYLLH KHYHDHQYGF PIDDDDELFG RLLLEINQAG LSWTLMLRKQ 
YSFRSAYDNF SIEKVAAYGE SDRERLLADP GIVRNRLKVN AAIVNAQKIL ELKQEYGSFK
GWIDAHHPLT KEQWIKLFKK TFKFTGGEIV NEFLMSTGYL PGAHDADCPV FALTNVTQAH
K