Gene Dfer_3909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3909 
Symbol 
ID8227504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4755268 
End bp4756080 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content50% 
IMG OID644931750 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003088278 
Protein GI255037657 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0841832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGT TGAACAAAAA TCTCTGGATC GTAGTCTCGT TGACTTTTCC TGCGTTCGCT 
CAGGCGCAGC TTCATAACCA CCCGGATTTA CCGAAATCGA AGCACGAAAC GGTCGTGATA
GCGCATCGCG GCAACCATGT GAATGTGCCG GAAAACACAT TGGCATCGAC CCGGGAGGCC
ATCAACTGTG GAGCGGATTA TGTGGAAGTG GATTTAAGGA CAACCAAAGA CGGTCATCTG
ATCGCCCTTC ATGACGCGAA AGTCGATCGG ACGACGAATG GTGCAGGTAA AGTTGCCGAT
ATGAGCTGGG CAGAAGTGGC GGAATTGCAG GTTTTTAACC GAAACAAGAG AACCCACCGG
ATTCCCGAGT TTAAGGAGGT GCTGGCGCTG TGCAAGGGGA AAATTAACAT TTACCTCGAT
TTCAAAGACG CCGATGTGGA AGAGACCTGG AAGCAAATCA AAGCGGCGGG AATGGAGCAT
CAAATCGTCA TTTATATCAA TAGCGAGGAG CAATATCATA AATGGAGGGA AGTTGCACCG
CGTGTGCCGC TGATGGCAAG CCTGCCCAAG GAGGTTACCA ATGAGGAGCA GTTGCGGAGT
TTTATCAGCC GGATTTATGT GGATGTGCTG GATAATGTTA CGACTCCTGA ATTGGTGGAG
GCCGCCCGCA TCAAAAACGT ATTCGTTTGG CTCGATGTAC AAAATCCTGC CGAAGGTCCT
GCATCATGGA ACGAGGCATT GCGCAAAGGC GTGCATGGTC TGCAAACGGA TAAGCCGGCT
GACTTGGTTG CTTACATGCG TGATCATTTG TGA
 
Protein sequence
MKLLNKNLWI VVSLTFPAFA QAQLHNHPDL PKSKHETVVI AHRGNHVNVP ENTLASTREA 
INCGADYVEV DLRTTKDGHL IALHDAKVDR TTNGAGKVAD MSWAEVAELQ VFNRNKRTHR
IPEFKEVLAL CKGKINIYLD FKDADVEETW KQIKAAGMEH QIVIYINSEE QYHKWREVAP
RVPLMASLPK EVTNEEQLRS FISRIYVDVL DNVTTPELVE AARIKNVFVW LDVQNPAEGP
ASWNEALRKG VHGLQTDKPA DLVAYMRDHL