Gene Dfer_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3902 
Symbol 
ID8227497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4746640 
End bp4748139 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content56% 
IMG OID644931743 
Productglycerol kinase 
Protein accessionYP_003088271 
Protein GI255037650 
COG category[C] Energy production and conversion 
COG ID[COG0554] Glycerol kinase 
TIGRFAM ID[TIGR01311] glycerol kinase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAT ACATTGCCGC CATTGACCAG GGTACTACCA GCACGCGCTG CATACTTTTC 
AACCAGCAGG GAAATATCGT TTCGGTAGGA CAAAAAGAGC ACGAACAGAT TTACCCGCAG
CCGGGCTGGG TAGAGCACAA TCCCACTGAA ATCTGGAAAA ACACCCTGGA AGTGATCGCA
TTGGCGCGGA TTAATGTGTC GGCGCACGCG CAGGACATCG CCGCCGTGGG CATTACCAAC
CAGCGCGAAA CGACGGTGGT ATGGAACAAG CGCACCGGCA AGCCTTACTA CAATGCATTG
GTGTGGCAGG ACACGCGCAC CACCGACCTC GTCGCGAAAT ACGAGCGGGA AGGCGGCCTC
AACCAATTCC GCGACATTAC CGGCCTCCCT GTTTCAACTT ACTTTAGTGG TTTAAAACTA
AAATGGCTGC TGGACAACGT AGAGGGCATC CGCGAAGACG CTGAAAAAGG CGAAGCGATT
TTCGGAAACA TCGATACTTT CCTGATCTGG CACCTTACCG GCGGCACGCA CGGCGGCATT
CACGTAACCG ATGTTACCAA TGCAAGCCGC ACGCAGCTGA TGAACCTGCG GACATTGCAA
TGGGACAAAT CCATGCTGGC CGCCTACAAT ATCCCCGAAA TTATGCTGCC CGCCATCAAA
AGCAGCAGCG AAATATATGG TTATTCCGAT CACGAGGTAC TGCCGGGCGT GCCCGTCGCC
GGCGACCTGG GCGACCAGCA TGCGGCATTG GTAGGCCAAA CCTGCTTCGA ACCGGGCATG
GCCAAAAACA CCTACGGAAC CGGCTGCTTC CTCGTGATGA ACACCGGTAC CGAACTGAAA
ACCTCTGAAA ACGGCCTGCT GACAACCATT TCCTACAAAT TCGGCGACCA GCCGGTGCAA
TATGCGCTGG AAGGAAGTGT GGCCGTCACC GGCGCGCTGG TGCAATGGCT GCGCGATAAC
CTCGGCCTGA TCCAGAACGC CAGCGATATT GAAGCCCTCG CCCAAACCGT CGAAGACAAT
GGCGGCGCCT ATTTCGTACC AGCATTCTCA GGCTTGTACG CGCCCTACTG GCGCAACGAC
GCCCGCGGTG TAATCGCAGG CCTTACGCGC TACGTGAACA AAGGGCACAT TGCCCGGGCA
GTTTTGGAAG CCACGGCTTA CCAAACGGTG GACGTCGTGA AAGCAATGGA ACAAGATTCC
GGCATCGAAC TGGCCAGCCT ACGTGTCGAC GGCGGTATGG TGCATAACCA GCTCCTAATG
CAATTCCAAT CGGATATTCT CGATACCCAG GTCGTTTCAC CGGCCGTAGC CGAAACCACC
GCGCTCGGCG CCGCCTACGC TGCGGGCCTG GCCGTTGGCT ATTGGAAAAG CACCGATGAT
TTGAAGAAAA ACTGGGCCGT TGCTCACACC TGGAACCCTA ATATGGCCGA GGAAACGCGG
AATGCATACT ACAAAGGCTG GAAGAAGGCT GTTACCAAGT CGTATGATTG GATTGACTAA
 
Protein sequence
MSKYIAAIDQ GTTSTRCILF NQQGNIVSVG QKEHEQIYPQ PGWVEHNPTE IWKNTLEVIA 
LARINVSAHA QDIAAVGITN QRETTVVWNK RTGKPYYNAL VWQDTRTTDL VAKYEREGGL
NQFRDITGLP VSTYFSGLKL KWLLDNVEGI REDAEKGEAI FGNIDTFLIW HLTGGTHGGI
HVTDVTNASR TQLMNLRTLQ WDKSMLAAYN IPEIMLPAIK SSSEIYGYSD HEVLPGVPVA
GDLGDQHAAL VGQTCFEPGM AKNTYGTGCF LVMNTGTELK TSENGLLTTI SYKFGDQPVQ
YALEGSVAVT GALVQWLRDN LGLIQNASDI EALAQTVEDN GGAYFVPAFS GLYAPYWRND
ARGVIAGLTR YVNKGHIARA VLEATAYQTV DVVKAMEQDS GIELASLRVD GGMVHNQLLM
QFQSDILDTQ VVSPAVAETT ALGAAYAAGL AVGYWKSTDD LKKNWAVAHT WNPNMAEETR
NAYYKGWKKA VTKSYDWID