Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3898 |
Symbol | |
ID | 8227493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4742313 |
End bp | 4744232 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644931739 |
Product | proton-translocating NADH-quinone oxidoreductase, chain L |
Protein accession | YP_003088267 |
Protein GI | 255037646 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAT CATTACTCAT CCTGATTCCG CTGCTGCCGC TCGTTGGCTT TCTGATCAAC GGAATCGGAT TTCCCAATAT TCCCAAAGGC GCAGTCGGCA TTATCGGAAC GTTGGCAGTT GTTGCCAGCT TCGTATTGTC CGTCATGACG TTCAATGCAT TCGTTGCAGC CGGCAGCCAG CCGTTCGTCC TGCCGCTTTT CGACTGGATC ACCGTCGGCG ACCTCCACAT CCCGTTCTCA TTCCAGATCG ACCAGCTGTC ATTGCTCATG CTGATGATCA TCACCGGCGT AGGCTCGCTG ATCCACATTT ATTCGATTGG CTACATGCAC CACGACTCAG GTTTCGGCAA GTTTTTCGCT TACCTGAACC TGTTTTTGTT TTTCATGCTC CTGCTGGTGC TCGGCTCGAA CTACGTGATC ATGTTCATCG GCTGGGAAGG TGTGGGACTT TGTTCTTACC TGCTCATCGG CTTCTGGAAC AAGAACACCA ACTACAACAA TGCAGCCCGC AAGGCATTCA TTATGAACCG TGTGGGTGAC CTTGGGTTCC TGCTCGGGAT CTTCACGATC ATCGCCACAT TCGGTTCGGT GGAATATACG GAGGTTTTCA GCAAGGCTGC TGCGGGCTTC CAGGTGGGTG ACCCGGTGAT TATCACCATT ACATTATTCC TGTTTGTTGG AGCAATGGGT AAATCGGCGC AGATTCCCTT GTATACCTGG CTTCCTGACG CGATGGCCGG CCCTACGCCT GTATCCGCAC TGATCCACGC CGCTACGATG GTTACCGCGG GTATTTACAT GGTGATCCGC TCCAACGTGC TGTATTCCCT CGCGCCTTCC ACGCTCGAAA TCGTAGGCAT TATCGGTGGC GCCACCGCAT TGTTCGCCGC GTCGATCGGT CTCTTGCAAA ACGATATCAA GAAAGTGCTC GCGTACTCTA CGGTGAGCCA GCTGGGTTAT ATGTTCATGG GTCTGGGTGC GATGGCCTAC TCGGCGTCGA TGTTCCATGT GATCACCCAC GCATTCTTCA AAGCATTGCT CTTCCTCGGC GCCGGTAGCG TTATCCACGC CATGTCCGAC GAGCAGGATA TCCGTTCAAT GGGTGGATTG CGCAAGAAAT TGCCTGTTAC ATTCCTTACA TTCCTTATCG CCACCATCGC GATTTCAGGT ATCCCGCCAT TTGCAGGTTT CTTCTCGAAA GATGAGATCC TTGCGCATGT TTTTGAACAC AACAAAATCC TCTGGGTAAT TGGTGTGCTG GGTTCAGTTA TGACTTCCTT CTACATGTTC CGCCTATTGT TCCTGACTTT CTTCGGTACA TTCCGCGGCA CGCATGAGCA AGAGCACCAT TTGCATGAAT CACCGGCTTC TATGACCGTT CCGCTGATCA TCCTCGCCAT TCTTTCGGCC GCAGGTGGTT TTATCGGCGT TCCCGAAGCA TTGCACGGTT CGCATCAGCT GGCGCAGTTT ATGGCGCCGC TTTACGACCT GGCCAAAACC GCCAATCCGG CAGCATTTGC ACATACTTCG CTTTCGCATT CCGAAGAATA TATGCTGATG GCCATTTCGG TGGCGGCGGC GTTGATCTCG GCCATTGCGG CTTATGTGAT GTATGTGCAA AAAGGCGCGG TGCCGGCAGC GGATACGGAG GAAAAATCGG GCTTGCAGCG GGTTATTTAC AACAAATACT ACGTGGATGA GCTGTACGAC TCGGTATTTG TAAAACCTGT AAAAGTGCTT TCCAACTTCC TGTACGCCGC GGGCGAATTT GCGATCGACC TTATCATCGA TGCGGTGGTG AAGCTGGTGG GCCTGTTTGC GAAATTGTTG AGGAAAACCC AAACCGGCTC CACCGGCGAA TATGTGTTCG CAATGGTGAT CGGCATTGTG GTCATCCTGT TCTGGAAGCT GTTACTCTGA
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Protein sequence | MSASLLILIP LLPLVGFLIN GIGFPNIPKG AVGIIGTLAV VASFVLSVMT FNAFVAAGSQ PFVLPLFDWI TVGDLHIPFS FQIDQLSLLM LMIITGVGSL IHIYSIGYMH HDSGFGKFFA YLNLFLFFML LLVLGSNYVI MFIGWEGVGL CSYLLIGFWN KNTNYNNAAR KAFIMNRVGD LGFLLGIFTI IATFGSVEYT EVFSKAAAGF QVGDPVIITI TLFLFVGAMG KSAQIPLYTW LPDAMAGPTP VSALIHAATM VTAGIYMVIR SNVLYSLAPS TLEIVGIIGG ATALFAASIG LLQNDIKKVL AYSTVSQLGY MFMGLGAMAY SASMFHVITH AFFKALLFLG AGSVIHAMSD EQDIRSMGGL RKKLPVTFLT FLIATIAISG IPPFAGFFSK DEILAHVFEH NKILWVIGVL GSVMTSFYMF RLLFLTFFGT FRGTHEQEHH LHESPASMTV PLIILAILSA AGGFIGVPEA LHGSHQLAQF MAPLYDLAKT ANPAAFAHTS LSHSEEYMLM AISVAAALIS AIAAYVMYVQ KGAVPAADTE EKSGLQRVIY NKYYVDELYD SVFVKPVKVL SNFLYAAGEF AIDLIIDAVV KLVGLFAKLL RKTQTGSTGE YVFAMVIGIV VILFWKLLL
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