| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3897 |
|---|
| Symbol | |
|---|
| ID | 8227492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4740810 |
|---|
| End bp | 4742258 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644931738 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| Protein accession | YP_003088266 |
|---|
| Protein GI | 255037645 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTACTC TTCTTTTAAT ACTATTACCG ATAGCGGCAG GCGTGATCAC CCTCCTGGCC
GGCGAACGCA TGGCGAAGCA GCTTGCGCTG GTTGGCGGCC TCGCTTCTTT GGGCGTGGCT
ATATTTACCT GGCTGCAATT TGACCCGGCG GCCGGCTCGC AGTTTGGCTT CAAATACGCC
TGGCTTGCTT CCGGAGGCAT TTCGTTCGCA GCGGGTATCG ACGGCATCAG CATGTTGCTC
GTGCTCCTGA CGACCTTCCT CACGCCGCTG ATCATCCTTT CCGCATTCAA GAACGATTAC
AAAAACCCCG CATCATTCTA CTCGCTGATC CTCTTCATGG AAGCGGCGCT GATCGGCGTT
TTCACGGCAA CCGACGCATT CCTTTTTTAC CTTTTCTTCG AGGCTGCATT GATCCCGGTG
TACTTCCTGT CGGCGATCTG GGGCGGAGAA AATCGTATTA AAGTCACTTT CAAATTCTTC
ATCTACACGA TTTTCGGAAG CTTGTTCATG TTCGTGGCAT TGGTTTACCT CTATTACCAA
ACGCCGGGCG AACATTCCTC CGAAATTGCT GCATTTTACC AGCTCCAACT GAGCCCCGCC
GCGCAGGGCC TGCTGTTCTG GGCATTCTTT ATTGCATTCG CGATTAAAAT GCCGCTGTTC
CCGTTCCATA CGTGGCAGCC TGATACTTAC ACCGAATCAC CCACTCCTGC AACGATGCTT
CTATCGGGCA TTATGCTTAA AATGGGGGTT TACGGGCTGA TCCGCCTGCT GTTGCCGATC
GTGCCGCTGG GCATGGAGCA ATGGGGCTTC CTCGCGATGA TCCTTTCGGT GATCGGTATC
ATCTACGGTT CCATCATCGC CATCCAGCAG AGCGATATGA AAACGCTCAT CGCCTATTCA
TCCTTCGCAC ACGTGGGACT GATGGCCGCC GGCGTGTTCT CGTCTTCATT GAACGGCTTG
CAGGGCGCAT TGATCCAGAT GCTCGCACAC GGTATCAACG TAATCGGCCT GTTCTTCATC
GTCGACATTA TTTATTCCAG AACCAAAACC CGCTATCTCG ATCAGCTCGG GGGCATTACC
CAGAGCACGC CGCATTTGAG CGTGTACTTC ATGATATTGC TGCTCGGTAG CGTTGCATTG
CCTCTTACCA ACGGTTTCGT AGGGGAATTC CTGTTGCTCT CCAGCGTATT CGCATACAAA
GGCTGGCTGG GTGCAGTGGC CGGTCTGACG ATCATTCTGG GTTCGGTGTA TATGCTCCGT
TTGTTCCAGA AATCCATGTT CGGCCCGAAA TCGAAATGGG TGGAAGGTTT CCAGGACCTG
ACTGCCAGCG AGCGCGCCGT ATTGCTGCCG CTGATCGTGA TGGTATTCTG GATCGGTATT
TACCCAAGCA CATTCCTGAA AATAACTGAG CCTGCTGTAA ACCAACTGTT GCAACTGGTC
AATAACTAA
|
|---|
| Protein sequence | MLTLLLILLP IAAGVITLLA GERMAKQLAL VGGLASLGVA IFTWLQFDPA AGSQFGFKYA
WLASGGISFA AGIDGISMLL VLLTTFLTPL IILSAFKNDY KNPASFYSLI LFMEAALIGV
FTATDAFLFY LFFEAALIPV YFLSAIWGGE NRIKVTFKFF IYTIFGSLFM FVALVYLYYQ
TPGEHSSEIA AFYQLQLSPA AQGLLFWAFF IAFAIKMPLF PFHTWQPDTY TESPTPATML
LSGIMLKMGV YGLIRLLLPI VPLGMEQWGF LAMILSVIGI IYGSIIAIQQ SDMKTLIAYS
SFAHVGLMAA GVFSSSLNGL QGALIQMLAH GINVIGLFFI VDIIYSRTKT RYLDQLGGIT
QSTPHLSVYF MILLLGSVAL PLTNGFVGEF LLLSSVFAYK GWLGAVAGLT IILGSVYMLR
LFQKSMFGPK SKWVEGFQDL TASERAVLLP LIVMVFWIGI YPSTFLKITE PAVNQLLQLV
NN
|
|---|
| |