Gene Dfer_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3893 
Symbol 
ID8227488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4736058 
End bp4736831 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content51% 
IMG OID644931734 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003088262 
Protein GI255037641 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATA CAGTACGTGC AGAAGGCAGG TTCAAATTTA TCGACGAGGG AAAGGGCGAG 
ACGTTACTGC TTTTGCATGG CCTTTTCGGT GCATTGAGTA ACTGGGATGG CATTATCGAC
CATTTTTCAA GTCGTTACCG GGTCGTTATT CCACTTCTTC CGATTTATGA ACTTCCGCCG
CGCGAGGCTG GCCTGGAAGC GCTGCTCGCC TTTCTGGAAG ACTTTGTTTC ATTTAAAAAT
CTAACCAACG TTACCGCTAT CGGCAACTCG CTGGGTGGCC ATATAGGCTT GCTATACACG
CTGAAAAACC AGGAGAACGT GCAGCGGCTG GTCCTGACGG GCAGCTCGGG CCTGTTCGAA
AACTCAATGG GCGGCTCGTT CCCGAAACGC GGAAGTTATG ATTATATCAA GGAGCGCGTA
GCATATACTT TCTACGATCC GGAGGTGGCG ACGAAAGACC TGATCGACGA GGTGTTCGAA
ACCACATCCA GCATTCCGAA ATGCATGAGC ATCGTTGGAA TCGCTAAATC GGCTCAGCGT
CATAATCTGG CCAAAGATCT GCATCAGATC ACCGTGCCTA CGCTACTCGT GTGGGGCCTG
AACGACACCA TTACGCCGCC GCATGTCGGA TACGAATTTA ACCGCCTGAT AGCCAACTCT
GAATTGTACT TTATCGATAA GTGCTGCCAT GCACCGATGA TGGAACATCC GCACGAGTTC
AACGTGATCC TGGAAAGCTT CCTCGAAAAA GACGTGTCGG TGCCCATGGC CTGA
 
Protein sequence
MKYTVRAEGR FKFIDEGKGE TLLLLHGLFG ALSNWDGIID HFSSRYRVVI PLLPIYELPP 
REAGLEALLA FLEDFVSFKN LTNVTAIGNS LGGHIGLLYT LKNQENVQRL VLTGSSGLFE
NSMGGSFPKR GSYDYIKERV AYTFYDPEVA TKDLIDEVFE TTSSIPKCMS IVGIAKSAQR
HNLAKDLHQI TVPTLLVWGL NDTITPPHVG YEFNRLIANS ELYFIDKCCH APMMEHPHEF
NVILESFLEK DVSVPMA