Gene Dfer_3891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3891 
SymbolppnK 
ID8227486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4734329 
End bp4735204 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content55% 
IMG OID644931732 
Productinorganic polyphosphate/ATP-NAD kinase 
Protein accessionYP_003088260 
Protein GI255037639 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CCATTCACGG ACGCAACTTT AACGAGTCCG CCAGACCTTT CATTGAAAAC 
ATGTTCGATG AACTGTCGCG CCGAAAAGTC GAGGTTCAGC TTTCGAAGTC GTTCCGGACT
TTTCTGGATC AGGCCGGGAT TTCGCATTAT TCGGAACAGG TTTACGAAAA ACCGGAAGAG
CTCTGCGATG CGCGCCTGGT CGTGAGCATG GGTGGCGACG GCACGCTGCT GGAAACCATT
TCGCACGTGG GCAAGCGGCA AATTCCGGCC ATTGGGATCA ATGTGGGGCG TCTGGGCTTC
CTGGCGACCG TTTCGCCGGA ACGCATCACC GACATGATCG CCGCGCTCGA AAACAGCCAG
TTTCGCATCG ACGAGCGCAC ATTGGTGGAG GTAGAGTCGA ATATCGACCT GTTCGACGGA
CTGAACTTCG GTTTGAATGA CTTCACGATC ACCAAAACCG ATACTTCGTC GATGATCACC
GTCCACACTT ACCTGAACGA CGAATTTCTG AATTCCTACT GGGCCGACGG CCTCATCATT
TCCACACCCA CGGGCTCCAC GGGCTATTCA TTGAGCTGCG GAGGGCCTGT ACTTGTGCCG
CATTCGCAGA ACTTCATCGT GACGCCCATC AGCCCACATA ACCTCAATGT GCGACCGCTG
GTGGTGGAAG ATACTGCGGT GATCCGCCTG GAAGTGAAAA GCCGCAGCAG CAACTTCCTC
GTGTCGCTCG ATGCGCGTTC GCGCATTGTG GATGAAAACA CGCAGCTGCT GGTGCGTAAG
GCAGGCTTCC GGGCGCGCCT CATCAAGATG AAAGACGACA GTTTTCTGAA TACCCTGAGA
AGCAAGCTAT CCTGGGGCCT CGATATGCGA AATTAG
 
Protein sequence
MKIAIHGRNF NESARPFIEN MFDELSRRKV EVQLSKSFRT FLDQAGISHY SEQVYEKPEE 
LCDARLVVSM GGDGTLLETI SHVGKRQIPA IGINVGRLGF LATVSPERIT DMIAALENSQ
FRIDERTLVE VESNIDLFDG LNFGLNDFTI TKTDTSSMIT VHTYLNDEFL NSYWADGLII
STPTGSTGYS LSCGGPVLVP HSQNFIVTPI SPHNLNVRPL VVEDTAVIRL EVKSRSSNFL
VSLDARSRIV DENTQLLVRK AGFRARLIKM KDDSFLNTLR SKLSWGLDMR N