| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3890 |
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| Symbol | |
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| ID | 8227485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4733271 |
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| End bp | 4734299 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931731 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003088259 |
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| Protein GI | 255037638 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTA CCTTCCACAC TTTCGACCTC CAACTGAAAC ACACCTTCAC CATCGCGCAC
GACTCGCGCG ACGTGCAGCA AACGCTGATC GTACAGCTGA ACGACGGCAC CTTTGCAGGA
TTCGGCGAAG CCACTTCCAA CCCCTATTAT GGGGTCACGA TCGACAATAT GATCGCCGCA
TTGGACAGGG TGAAGCAAAT CGTGGAAGAG GGCCGTTACG GCTCCGCGGA AGAGCTTTGG
GCGCTTGCGC ATCCGCTTCT TAAAGATCAT CCATTTGCAC AATGTGCCCT GGACGAGGCT
GCGCAGGATT ATTTTGCCAA AAAAAGGGGC CTGAAACTCT ACGAAGCATG GGGCCTCTCG
CCGGAACATA TTCCGATGAC CAACTTCACG ATCGGCATCG ACACGGTGGA AAAGATGGTG
GCCAAAATGC AGGAGCTTCC CTGGCCGATT TACAAGATCA AACTCGGAAC CGACGAAGAC
CTGCGCATTG TTACGGAATT AAGAAAAAAT ACCGATGCGC TGTTTCGCGT GGATGCCAAC
TGCGGCTGGA CGGCCGAAAA AACCATCGAA CTTGCGCCCC AACTGGCTGC ATTAGGTGTC
GAGTTCATCG AGCAGCCATT GCCTGCCGAC GACATCGCGG GCATGAAAAA AGTGTTTGAA
GCGAGCGCAT TGCCTGTCAT TGCCGACGAA AGCTGCATTA TCGAAGCGGA CGTGGCCAAA
TGCCAGGGCT TGTTTCACGG TATCAACATC AAACTCACCA AATGCGGTGG CCCCACTGCG
GCATTGCGGA TGATCGCCGA AGCCAGGTCG CTGGGCATGA AAACGATGGT AGGCTGCATG
ACCGAGACTA GCGTAGGCAT CTCAGCCATC GCACATTTGC TCCCGCTGCT CGACTACGTG
GATATGGACG GCTCGCTCCT GATCCGCAAC GATCCTGCCA CCGGCGTAAC TTTCGACTTT
GGAAAGGTAA TTTATGCCAC AGGCAACGGC ACCGGCGCTG CATTGAAACC CGAATTCGTT
TCGCGGTGA
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| Protein sequence | MRLTFHTFDL QLKHTFTIAH DSRDVQQTLI VQLNDGTFAG FGEATSNPYY GVTIDNMIAA
LDRVKQIVEE GRYGSAEELW ALAHPLLKDH PFAQCALDEA AQDYFAKKRG LKLYEAWGLS
PEHIPMTNFT IGIDTVEKMV AKMQELPWPI YKIKLGTDED LRIVTELRKN TDALFRVDAN
CGWTAEKTIE LAPQLAALGV EFIEQPLPAD DIAGMKKVFE ASALPVIADE SCIIEADVAK
CQGLFHGINI KLTKCGGPTA ALRMIAEARS LGMKTMVGCM TETSVGISAI AHLLPLLDYV
DMDGSLLIRN DPATGVTFDF GKVIYATGNG TGAALKPEFV SR
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