| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3877 |
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| Symbol | |
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| ID | 8227472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4716037 |
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| End bp | 4718190 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931718 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_003088246 |
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| Protein GI | 255037625 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCA ACAAACTTGA AGCATTAAAA AAATATTTCG GATACGACTC CTTTCGCCCG
CAGCAGTCCG AAATTATCGA CACCATCATG GCCAACCGCG ACTGCATGGT GCTGATGCCC
ACAGGCGGCG GTAAATCCGT GTGTTTTCAG ATCCCTGCCG TGCTCCGCGA CGGTCTCACC
ATCGTGATAT CACCGCTGAT CGCCCTTATG AAAGATCAGG TGGAAGCATT GCGTGGAAAC
GGCATTAACG CAGCGTTCCT GAATTCCACA ATTTCCGGCG CCGAGCAGGA CCAAATCATG
TGGCAAATCA GGCTGGGTGA ATTGAAATTG CTATACATCG CGCCTGAAAG GCTTTTTGCA
GGAAATACCT TCGACCTCCT CCGCGAATGG AACGTAACCC TGTTCGCGAT CGACGAATCA
CACTGTATTT CCTCGTGGGG TCACGATTTC CGGCCGGAAT ACCGTCAGCT GAACCTGCTG
AAACTGCGCT TCCCCGACGT CCCGATCGTG GCGCTCACCG CCACCGCCGA CCGCGTGACG
CGCCGCGATA TCCTCAAACA GCTCAATATC GAACACGCCG AAACCTTCAT TTCCAGCTTC
GACAGGCCGA ACCTGAGCCT GAATGTACTG CCCGGGCGGA AGCGTATCGA GCAAATCCAG
CGCTTCGTGA ACAAACACGA AGGCCAGCCG GGCATTATCT ATTGCCTCAG TCGAAAGGGC
ACCGAAACCG TGGCGGCCAG CTTGCAAAAA GCCGGCTTTC GGGTTGCGTA CTACCACGCG
GGCATGCCCG GCGACAAGCG CTCGCAGGTG CAGGAGAATT TTTTGAGGGA CGATATCCAG
ATCATCGTCG CCACGATCGC ATTCGGAATG GGGATCGATA AATCCAATGT GCGCTGGGTG
ATCCATTACA ACCTACCCTC GAATGTCGAG AGCTTTTACC AGGAAATCGG TCGGGCGGGA
CGCGACGGTG CCAGCGCGGA CACGGTGCTG TTTTACAGCT ATCTCGATAT AATCACCCGG
CAGGATATGA TCAATAATTC GGATCAATCG GCCGAGCAAA AGGAGTTGCT TCATGCCAAA
CTGAACCGTA TGAAACAATA TGCCGAGGCC GATATCTGCC GTCGTCGCAT CCTTTTGAGC
TATTTCAACG AGCCCGTCGA CCACGACTGC GGCAACTGCG ACGTATGCCG CAACCCGCGT
ACGCGCTTCG ACGCAACCAT TATTGCCCAA AAAGCACTTT CCGGCATCGC CCGCACCGAA
CAGAAGGTGG CGATGGGGAT GCTCATCGAC ATTCTCCGCG GCAGCCGCAA CCGCAACATT
ATTCAACACG GCTACGAAAG GCTTCCTACT TTCGGCGTCG GGCACGAGCT GCGGACCGAT
GAATGGTCGG AATACCTGGG CCAAATGCTC AATTCCGGCG TGATGGACAT TGCTTACGAC
GAAGCGCATT CATTTAAACT GAACCCGGTG AGCTGGCAGG TTCTGAAAGG CGAGCGGCAG
ATCGAGCTCG TCAAATTCAT TCCGCTCAGC GAACGGAAGG CCAAGGAAGA AGAGCTGGTA
CCGAAGGAAA AACCCAAGCA GGAAATCATC CGCGACGCGC TTTTTGAACG CCTCCGGCAG
CTCCGCAAGA AGTTGGCCGA TGCTCTCGGC GTGCCGCCTT ACGTGGTCTT CAGTGACGCT
TCATTGTCGG AAATGGCGCA GAAAAAGCCG GTTTCAGAGG CGCAAATGAA GGCAGTTTCT
GGCGTCGGAG CGGAGAAATT TCGGCGGTAT GGAGAAGCTT TCATCAATGA AATCCTTGAT
TTCGCGCGAG AGAACAATGC TCCCGGCACG CGCGTGATGA AGGGAATGAC CTTCGTTGAA
ACGCTGGACC TTTATAATGA AGGTTACTCC GTAAAAGTAA TCGCAGAGAA ACGGAACCTG
AACCCCGTCA CGATCATCTC GCATTTGGTC AAGCTGAAAG AGGACGGCCA CGCCATTAAC
CTGAAATCGC TCATCGAACC CGCAGCCTAC ACCGCCATCA TTACCGCCGC GCAGGAAATC
CGGGCCGGCA AAAACGATCC GCTGAAACCA TTGTTCGAAC TGCTGAACGA ACGGTACGAT
TACGGCCAAC TCCGGCTGGC GCTGGCGATT TGGGAAGAGG AGCGACAAAA CTAG
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| Protein sequence | MSTNKLEALK KYFGYDSFRP QQSEIIDTIM ANRDCMVLMP TGGGKSVCFQ IPAVLRDGLT
IVISPLIALM KDQVEALRGN GINAAFLNST ISGAEQDQIM WQIRLGELKL LYIAPERLFA
GNTFDLLREW NVTLFAIDES HCISSWGHDF RPEYRQLNLL KLRFPDVPIV ALTATADRVT
RRDILKQLNI EHAETFISSF DRPNLSLNVL PGRKRIEQIQ RFVNKHEGQP GIIYCLSRKG
TETVAASLQK AGFRVAYYHA GMPGDKRSQV QENFLRDDIQ IIVATIAFGM GIDKSNVRWV
IHYNLPSNVE SFYQEIGRAG RDGASADTVL FYSYLDIITR QDMINNSDQS AEQKELLHAK
LNRMKQYAEA DICRRRILLS YFNEPVDHDC GNCDVCRNPR TRFDATIIAQ KALSGIARTE
QKVAMGMLID ILRGSRNRNI IQHGYERLPT FGVGHELRTD EWSEYLGQML NSGVMDIAYD
EAHSFKLNPV SWQVLKGERQ IELVKFIPLS ERKAKEEELV PKEKPKQEII RDALFERLRQ
LRKKLADALG VPPYVVFSDA SLSEMAQKKP VSEAQMKAVS GVGAEKFRRY GEAFINEILD
FARENNAPGT RVMKGMTFVE TLDLYNEGYS VKVIAEKRNL NPVTIISHLV KLKEDGHAIN
LKSLIEPAAY TAIITAAQEI RAGKNDPLKP LFELLNERYD YGQLRLALAI WEEERQN
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