| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3874 |
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| Symbol | |
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| ID | 8227469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4711345 |
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| End bp | 4715130 |
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| Gene Length | 3786 bp |
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| Protein Length | 1261 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931715 |
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| Product | Non-specific serine/threonine protein kinase |
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| Protein accession | YP_003088243 |
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| Protein GI | 255037622 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.646878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACG AAAAGAAGGA GAAATTATCC AACTTCTTAA TAAGACGGGC GGAGCGGGAT
GTATTGTCAA GAGGGCGTTC CATTTATAGC AGTGGCGGCT TAAAGGTTTC CAAACTCGAT
TATAATGGCC CCGGTAATGC CGAGTTCAAG GTCAAAAGCG ACTACTCGAT CCAGTATTAC
CAGATTTTCA TCCGCGATTT TCTCACACCG CAGATCACCA CCGAATGTTC TTGTCCGGAC
AAAGCCGGGC TGTGCAAACA CCGCGTGGCC GCCATTTTGT ACATTCTCGA CAAAATGCCG
ACCATCAAGC AGGTGGTGCA CGAAATGGCC AGCACGACCA TCGAATTGCA CGAGCTTCGC
GAAATGCAGC TCCGCAGCAT GGTGCTCGAA GAAACCTGGC AAAACCGCGC CAATGTAGGA
CCGGTAGAGA TCGTATCCGC TCGCGAGGGC GAGGCCGAAT GCGAGGTGAC CGACAAGGGT
CAGACATTTA TGACCACCTT CCGGCGCGTG AAAGGAACAA GGCAGATCCA GACCTCCTGT
ACCTGTAACC AGAAACTCTG GGTGCCGCTT TGCGAACACA AGCTGGCCGC ATTGCTGAAA
CTCCGCGAAG AGCTGGGCGA AAAGGCATTT GAGGTAATGC GCGACCTGAC CGTAGAGAAA
ACCAACCTGC TGGCCGAATA CGGCTATTCG CTCGAAGATC CTTATAAAGA TAAATTCGAA
TTCCGGCTCG ATGAGGACGG AGGCCTGCAC CTGATCAAGC TCGATCCGGC GATTCAGAAA
GTGGGCGCTT ACCAGGATTG GCAATCGTTG CGTGAGCGCA TATTGCCCGT GCAGGAGTCG
TCGTTTGCGG TAACGCTGAC CGACAACGGC CAGGACGACG AGGACCGCGT TTCCATTTTT
GTGTTTTGGC CAAAAGGCAA AAATCATTTG CTGGATATCG GCTTCGGTGT TTTTTCGGTC
AAATTCAGTT CTAAATCAGA GAAGGTAACG AACATCCGCA ACATTGCGGG CGGTTCGAGC
CATTACTATA ATGCGGATGA GATTCCCGTG CTGACGGAAG CCGACGCACG CCTGGTGCGC
ATGGCGAAGC ATTGGGAAGA AGGTTTGCAG AAATTCATCC GCAAGCAAGG CTGGGCGTAT
AATGCATACC TGCATTTCGA CGACGTGGAA GCCGAGCAAC GCTACGAAGC CCGCAATTAC
GTAGGCAAGC AGCTAACCCG CGTTTTCAAC GATCTCGACG GCGACCGCCT TTTCCTCGCC
GACGGCGATT ACGTGACCAG CAACCACCAG CTCACACAGC TGGAACTGCA CCGCGAGCCG
GTGAAGCTGT TTTTTGTGCT CACGGAAGAC AAAGAGTTTA TCACGCTGAA CCCCTATGTG
GAGATCAAAC CCGGCACACC GCTGGAATTG CAGAAGGTGG TCACGCTTGA TAGTTTCTGG
CTGGGGCTTT ATAACGAGAA GACATTATTC CGCTGGGCGG GTCTCAGCGA GGCCGAAATG
GTCGCTTACC TGGGCCAGAA CGGATTCAAA ATAAGGGTTA AGAAGGACTA TGGAGACGAT
TTTCTCAAAA ACTGGATCAT CCCGGTTTCC GAAAAATTCG ATGTGATATT CCAGACCCGG
CACGAGATAC AAACTTCACC GCTGGCATTC CAAAAGCCCA AATTTTACCT GAAAGAGGAC
GAGGCCAACC TGCTCATTGT GCCTTCCTAC ATTTACCTTG AACAAAACGG TAAAGAGGAG
GAACTGGAAC TGCTCCACGA CCAGCGCCGC ACTAAAACCG GCTTCGACAA CAACCAGATC
ACCATGCTGG AACGCGACGT TCAGGCGGAA AATGCGGTTT GGGAATGGAC GAAGGCGCTG
CATCCGGAAT TTGCGCATCA AACCGGCCAG CCGTTTTTCT ATGTGCCGTT CGAGCAGGTG
ATGAAGAATG GATGGTTATT CAATTTCGTG GACGCCGCCA AGAAGAAACA CTACGAGATT
TTCGGGTTCA AAGACCTGAA AAAGATGAAG TTCAACCCGA ACCGCGGACA GGTGAAGGTG
CACACCTCGT CGGGGATCGA CTGGTTCGAT ATGAAGATCG AGATCACTTT CGGGGATCAG
ACGGTATCGC TGGCCGATGC GAAAAAGGCA TTACTTAAGA AGCAGAATTA CATTCAGTTG
CAGGATGGCT CGCTGGGCGT GCTGCCCGAC GAGTGGATAG CCAAGCTGGA ACCGCTCATG
CAGTTTGGCC GCGTGCAGGA CGACCAGATA CATTTGTCCA AAATCCATTT CTCGCTGATC
GACGAGCTGG TTTCAGAGGT GGACAATGAG GAGGTTTTCC GTGAACTTTG GGAGAAAAAG
CAGAAGCTGC TCAATTTTAA GCAAATCCCT TCCGTCCCGC TTCCGCAAAA CATCGAAGCG
ACGCTCCGGC AATACCAGGA GGAAGGTTAC AAATGGCTGC ATTTCCTCGA CGAATTCCAA
TGGGGCGGTT GCCTGGCGGA TGATATGGGT TTGGGCAAAA CCCTGCAAAT GCTCACCTTC
CTGCAAAACC AGAAAAACCT GAATGCGGGA TATACGAACC TTGTCGTAGT TCCTACCACG
CTGATTTTCA ACTGGCAGGC AGAGGCGGCC AAATTTACGC CCGATTTGAA GTTATACGTT
CACCGTGGGA TGGCACGCCG GAAAGACATT GATTTTTTCC GCGAGTACGA CATCATTCTT
ACCACCTACG GCACCATGCG CAGCGATGTG GAGCTGTTGC GCCAGTTTGA TTTCAACTAT
ATTATACTCG ATGAAGCGCA GGCCATTAAA AACCCCGATT CGCTTACATC GAAAGCCTCG
CGCCTCCTCC GCGCGCGCAA CCGCCTTACC ATGACGGGTA CGCCGGTGGA GAACAATACA
TTTGATCTGT ACTCCCAATT CGAGTTCCTG AACCCGGGCA TGCTCGGCCA CGCCGACTTC
TTCCGTACGG AATACGCGAC GCCGATCGAT AAGTACCAGG ACAAGGAAAA GGCGGCCGAA
CTCCGCAAGC TGGTATATCC ATTCATGCTG AAACGCACGA AAGAGGAGGT AGCGACCGAC
TTGCCGGATA AAACCGAGAC CATCCTGTTT TGCGAAATGG GCAATAAGCA ACGGAAGGTG
TACGACACTT TCCGCGAGCG CTACCGCCAG GAAATCGCCG AGAAACTCGC CACCGAAGGG
CTTAACAAGA GCAGTTTCCT CATCCTGGAA GCACTTTTGA AACTCCGCCA GATTTGCGAT
TCACCGTCGA TTTTGTCGGG AGACGAGGAC TTTGGCAATG AATCGGCGAA GCTGGAAGAG
ATCACGCGCG AGATCGAAGA GAATGCATCT AATCATAAAA TATTGATATT CAGCCAATTT
CTGGGAATGC TCGACCTGAT TCGCAAGCAT TTGGAAAAAA TGAATATCCC TTACGAATAC
CTGGACGGCC AAACTGTGGA CCGCGCCGGC CGTGTGAACC GTTTCCAAAA CGACGATACT
TGCCGGGTGT TCCTGATGAG CCTCAAAGCG GGCGGAGTAG GGCTTAACCT CACCGAAGCG
GACTACGTTT ACCTTGTGGA CCCGTGGTGG AACCCGGCCG TTGAGCGTCA GGCGATTGAC
CGCACGCACC GCATCGGACA AACGCGGAAG GTATTTGCCT ATAAAATGAT TTGCAAGGAT
ACGATTGAAG AGAAAATTCT GCTTTTGCAG CAGCGCAAGC AGGACTTGGC GGAAGATTTG
GTAGGCGGCG AATCCGGCTT TATCAAAAAA CTCAGCCAGG AAGATATAAT GGGACTTTTC
AGCTGA
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| Protein sequence | MENEKKEKLS NFLIRRAERD VLSRGRSIYS SGGLKVSKLD YNGPGNAEFK VKSDYSIQYY
QIFIRDFLTP QITTECSCPD KAGLCKHRVA AILYILDKMP TIKQVVHEMA STTIELHELR
EMQLRSMVLE ETWQNRANVG PVEIVSAREG EAECEVTDKG QTFMTTFRRV KGTRQIQTSC
TCNQKLWVPL CEHKLAALLK LREELGEKAF EVMRDLTVEK TNLLAEYGYS LEDPYKDKFE
FRLDEDGGLH LIKLDPAIQK VGAYQDWQSL RERILPVQES SFAVTLTDNG QDDEDRVSIF
VFWPKGKNHL LDIGFGVFSV KFSSKSEKVT NIRNIAGGSS HYYNADEIPV LTEADARLVR
MAKHWEEGLQ KFIRKQGWAY NAYLHFDDVE AEQRYEARNY VGKQLTRVFN DLDGDRLFLA
DGDYVTSNHQ LTQLELHREP VKLFFVLTED KEFITLNPYV EIKPGTPLEL QKVVTLDSFW
LGLYNEKTLF RWAGLSEAEM VAYLGQNGFK IRVKKDYGDD FLKNWIIPVS EKFDVIFQTR
HEIQTSPLAF QKPKFYLKED EANLLIVPSY IYLEQNGKEE ELELLHDQRR TKTGFDNNQI
TMLERDVQAE NAVWEWTKAL HPEFAHQTGQ PFFYVPFEQV MKNGWLFNFV DAAKKKHYEI
FGFKDLKKMK FNPNRGQVKV HTSSGIDWFD MKIEITFGDQ TVSLADAKKA LLKKQNYIQL
QDGSLGVLPD EWIAKLEPLM QFGRVQDDQI HLSKIHFSLI DELVSEVDNE EVFRELWEKK
QKLLNFKQIP SVPLPQNIEA TLRQYQEEGY KWLHFLDEFQ WGGCLADDMG LGKTLQMLTF
LQNQKNLNAG YTNLVVVPTT LIFNWQAEAA KFTPDLKLYV HRGMARRKDI DFFREYDIIL
TTYGTMRSDV ELLRQFDFNY IILDEAQAIK NPDSLTSKAS RLLRARNRLT MTGTPVENNT
FDLYSQFEFL NPGMLGHADF FRTEYATPID KYQDKEKAAE LRKLVYPFML KRTKEEVATD
LPDKTETILF CEMGNKQRKV YDTFRERYRQ EIAEKLATEG LNKSSFLILE ALLKLRQICD
SPSILSGDED FGNESAKLEE ITREIEENAS NHKILIFSQF LGMLDLIRKH LEKMNIPYEY
LDGQTVDRAG RVNRFQNDDT CRVFLMSLKA GGVGLNLTEA DYVYLVDPWW NPAVERQAID
RTHRIGQTRK VFAYKMICKD TIEEKILLLQ QRKQDLAEDL VGGESGFIKK LSQEDIMGLF
S
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