| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3868 |
|---|
| Symbol | |
|---|
| ID | 8227463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 4705827 |
|---|
| End bp | 4707065 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644931709 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_003088237 |
|---|
| Protein GI | 255037616 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTGA AATTGCTTTC GGCCAGTTTT GGAGCCATTT TGCTATCTAT CCATACCAGC
TTCGGGCAAG TCACTGAAAA CCCCAAAGTA GAAGAGTCGT CGGCGCCTTA TGTGAAAATC
AAGAAGGTGG AGCTGACGGA CAACAACACC ATTATCCACC TTCAATTTAT CGACGAAAAG
CCACAGCGGC CGCAATTCCG TTCGCAGCCA AGGCAGTTCC CGATCCCCGA TTCCCGCATT
CCGCCATTGC AGCAGCAAAG CCAGAGCCAG ATCTGGCTCG ACCCCGAAAC CCGGCTTTAC
AAACCAGGGG AAATTGATAA AAAATTCAAG TTCATCCGGG CGGAAAATAT TACTACGACC
ACCAGAATGA AGGTTGCAAA CGGCGATACG GTCGATTTCG TAGCCTATTT CGAACGACTT
ACGCCCGGTA TTGAAGAGTT CGATTTTTAT GAGGGAAGGA GTTCAGGCGG TAATCAATCG
TGGAATTTCT ATGGAATTCA CATCAAAAAC CCTTTGAAAA AAGAGCCGGC AAAAGCGGCG
AAACCCGCTG CTAAAACCCC GGAACCTGTG AAAAAGCCGG CTGCGAAACC ACTGGCAAAA
GCGCCAGAAA AGCCGGCAGT GGCTAAAAAG GATGCTGAAA TGGCCGTTTT GAAGGGCACG
GTTTACAACG CGAAAACGAA AGCGCCGATC GGCGCACAGA TTTCCTACAC CGAGGGCGGC
GACACGTTGC AGATCAGATC GTCGTCCGGG AAGTACAGCG TGGGCGTGGC CGGCAACGAA
AAGTACAAAT TCCGCGTCCA TGCGCGTGGC TTTTACGGAA CCTCGTTTAA CCTCACGCCG
GCCGATTCTA CCGACAAATC CTTTGCTCAG GACATCTATT TGACGCCGCT CAGCACGGGC
GAAACAATTC TGCTTCCGAA TATCTACTTC GAAACATCCA AATACACCCT GCTTCCGGAA
TCGTATGAAG AACTGAACCG GCTGGTGGAC GTGATGAGTG ATAGCCCGAC CGTGAAAATC
CGCGTGGAAG GCCATACCGA CAATGTGGGT GATTTCGACA AAAACCTCGA ACTCTCACGC
CAGCGCGCGG AATCGGTGAA AAACTATCTC GTAGAAAAAG GGATTGAAGG GAGCCGCATT
GAAGCGAAAG GCTACGGCGG CACGCGCCCG ATCACGAAAG GCAGCGAAGA AGAACGCAAA
AAGAACCGCC GGGTGGAGTT TGTGATCACG GACATGTAA
|
|---|
| Protein sequence | MNLKLLSASF GAILLSIHTS FGQVTENPKV EESSAPYVKI KKVELTDNNT IIHLQFIDEK
PQRPQFRSQP RQFPIPDSRI PPLQQQSQSQ IWLDPETRLY KPGEIDKKFK FIRAENITTT
TRMKVANGDT VDFVAYFERL TPGIEEFDFY EGRSSGGNQS WNFYGIHIKN PLKKEPAKAA
KPAAKTPEPV KKPAAKPLAK APEKPAVAKK DAEMAVLKGT VYNAKTKAPI GAQISYTEGG
DTLQIRSSSG KYSVGVAGNE KYKFRVHARG FYGTSFNLTP ADSTDKSFAQ DIYLTPLSTG
ETILLPNIYF ETSKYTLLPE SYEELNRLVD VMSDSPTVKI RVEGHTDNVG DFDKNLELSR
QRAESVKNYL VEKGIEGSRI EAKGYGGTRP ITKGSEEERK KNRRVEFVIT DM
|
|---|
| |