Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3868 |
Symbol | |
ID | 8227463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 4705827 |
End bp | 4707065 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644931709 |
Product | OmpA/MotB domain protein |
Protein accession | YP_003088237 |
Protein GI | 255037616 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTTGA AATTGCTTTC GGCCAGTTTT GGAGCCATTT TGCTATCTAT CCATACCAGC TTCGGGCAAG TCACTGAAAA CCCCAAAGTA GAAGAGTCGT CGGCGCCTTA TGTGAAAATC AAGAAGGTGG AGCTGACGGA CAACAACACC ATTATCCACC TTCAATTTAT CGACGAAAAG CCACAGCGGC CGCAATTCCG TTCGCAGCCA AGGCAGTTCC CGATCCCCGA TTCCCGCATT CCGCCATTGC AGCAGCAAAG CCAGAGCCAG ATCTGGCTCG ACCCCGAAAC CCGGCTTTAC AAACCAGGGG AAATTGATAA AAAATTCAAG TTCATCCGGG CGGAAAATAT TACTACGACC ACCAGAATGA AGGTTGCAAA CGGCGATACG GTCGATTTCG TAGCCTATTT CGAACGACTT ACGCCCGGTA TTGAAGAGTT CGATTTTTAT GAGGGAAGGA GTTCAGGCGG TAATCAATCG TGGAATTTCT ATGGAATTCA CATCAAAAAC CCTTTGAAAA AAGAGCCGGC AAAAGCGGCG AAACCCGCTG CTAAAACCCC GGAACCTGTG AAAAAGCCGG CTGCGAAACC ACTGGCAAAA GCGCCAGAAA AGCCGGCAGT GGCTAAAAAG GATGCTGAAA TGGCCGTTTT GAAGGGCACG GTTTACAACG CGAAAACGAA AGCGCCGATC GGCGCACAGA TTTCCTACAC CGAGGGCGGC GACACGTTGC AGATCAGATC GTCGTCCGGG AAGTACAGCG TGGGCGTGGC CGGCAACGAA AAGTACAAAT TCCGCGTCCA TGCGCGTGGC TTTTACGGAA CCTCGTTTAA CCTCACGCCG GCCGATTCTA CCGACAAATC CTTTGCTCAG GACATCTATT TGACGCCGCT CAGCACGGGC GAAACAATTC TGCTTCCGAA TATCTACTTC GAAACATCCA AATACACCCT GCTTCCGGAA TCGTATGAAG AACTGAACCG GCTGGTGGAC GTGATGAGTG ATAGCCCGAC CGTGAAAATC CGCGTGGAAG GCCATACCGA CAATGTGGGT GATTTCGACA AAAACCTCGA ACTCTCACGC CAGCGCGCGG AATCGGTGAA AAACTATCTC GTAGAAAAAG GGATTGAAGG GAGCCGCATT GAAGCGAAAG GCTACGGCGG CACGCGCCCG ATCACGAAAG GCAGCGAAGA AGAACGCAAA AAGAACCGCC GGGTGGAGTT TGTGATCACG GACATGTAA
|
Protein sequence | MNLKLLSASF GAILLSIHTS FGQVTENPKV EESSAPYVKI KKVELTDNNT IIHLQFIDEK PQRPQFRSQP RQFPIPDSRI PPLQQQSQSQ IWLDPETRLY KPGEIDKKFK FIRAENITTT TRMKVANGDT VDFVAYFERL TPGIEEFDFY EGRSSGGNQS WNFYGIHIKN PLKKEPAKAA KPAAKTPEPV KKPAAKPLAK APEKPAVAKK DAEMAVLKGT VYNAKTKAPI GAQISYTEGG DTLQIRSSSG KYSVGVAGNE KYKFRVHARG FYGTSFNLTP ADSTDKSFAQ DIYLTPLSTG ETILLPNIYF ETSKYTLLPE SYEELNRLVD VMSDSPTVKI RVEGHTDNVG DFDKNLELSR QRAESVKNYL VEKGIEGSRI EAKGYGGTRP ITKGSEEERK KNRRVEFVIT DM
|
| |