Gene Dfer_3863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3863 
Symbol 
ID8227458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4701157 
End bp4701951 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content55% 
IMG OID644931704 
Producthypothetical protein 
Protein accessionYP_003088232 
Protein GI255037611 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.725536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CCGCCCTGCT GATCATCGAC GCGCAATACG ATTTCTGCAA TCCGAATGGC 
ACCCTGTTCG TGCCCGGCGC GGAAAAGGAC GTGGAGCGCA TTGCCAACCT GATAGCGCTG
GAAGGCGACC GCATCGACGC GATTTTCCTG ACGCTCGACA CGCATAAGGT CCTCGACATC
GCCCACCCCC TATTCTGGGA AGATCAGAAT GGCAACACCG TCGCGCCGTT CACATTAATA
TCTGCAAAAT CAGTGGAAGC AGGCAAATGG GTGCCCCGGT ACCATGCCGA ATATGTTTTG
AAATACCTCC AAACCCTGGA AGCAGAGGGT GAATTCCAGC ATTTCATCTG GCCGGAGCAT
TGCCTGATCG GCTCGCCGGG CGCGGCACTG GACGATACCA TTATGCGCGC CGTGCTCGCC
TGGACGCACC GCACGCGCCG CGATTACCGG ACTGTCGCCA AAGGTATTAA CCCGCTGACG
GAGCATTTCG GTGTCTTCAA AGCGCAGGTC CCCGTAGAAA ATGCGCCTGA AACCCGGCTC
GACGAGCACT TTCTGAATGA GCTCAGCCAG TTCGACCAGG TGCTCATAGC AGGCGAAGCG
CGCTCGCATT GTGTGGCTAC GAGCATCAGG CAAATCGTGA AATATGCCCC GGCATTAGCC
GCTAAGGCGG TTGCATTGAC GGACTGCATG TCGGACGTTC CGAATTTCGA TCACTACGCC
GATCCCATTT TCGAAGAAGC AGCCCGGAGC GGCATGAAAT TTTTGAAATC CGGCCAGGTT
TTTAAAGAAA ACTAA
 
Protein sequence
MKKTALLIID AQYDFCNPNG TLFVPGAEKD VERIANLIAL EGDRIDAIFL TLDTHKVLDI 
AHPLFWEDQN GNTVAPFTLI SAKSVEAGKW VPRYHAEYVL KYLQTLEAEG EFQHFIWPEH
CLIGSPGAAL DDTIMRAVLA WTHRTRRDYR TVAKGINPLT EHFGVFKAQV PVENAPETRL
DEHFLNELSQ FDQVLIAGEA RSHCVATSIR QIVKYAPALA AKAVALTDCM SDVPNFDHYA
DPIFEEAARS GMKFLKSGQV FKEN