Gene Dfer_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3860 
Symbol 
ID8227455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4697227 
End bp4697715 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content55% 
IMG OID644931701 
ProductRES domain protein 
Protein accessionYP_003088229 
Protein GI255037608 
COG category[S] Function unknown 
COG ID[COG5654] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000550173 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.493922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTACC TGCCTGAGCC GCCTATGCCA TTGGTATACA GGATCACACG CGAAAAATTC 
CGATATGATG CGCTTTCTCC CGAGGGCGCC AGGCTCTACG GCGCACGCTG GAATCCGAGG
GGCGTTGGCG TACTTTACAC CACTTCTACT CCCGAACTAG GATTGGTAGA AACCCTCGCA
CACGCGCCGG GCGTGCGCTA TGAGGATCTT CCCAAATATT GGCTGTCGTC CATTGAAATT
CCCGACGATA TCCGGCATTA CGCGCGGAAA GACCTTCCTG ATTTTTGGCA GGACAAGACT
TATAGCCGGA CGCAATTCTG GCTTAAAGAC TGGCTCATTA AACCCGACGT CCTGGGCATC
GGCATTCCGT CAGTGATCGT CCCTTTTTCC TCCAATATTA TTCTCCATCC CGATCATCCG
CTGTTTGCGG ACATCAAACT CGTCGCCCAG GAGCCGATCC CGATCGACCG GCGCTTGTGG
CGCAGCTGA
 
Protein sequence
MVYLPEPPMP LVYRITREKF RYDALSPEGA RLYGARWNPR GVGVLYTTST PELGLVETLA 
HAPGVRYEDL PKYWLSSIEI PDDIRHYARK DLPDFWQDKT YSRTQFWLKD WLIKPDVLGI
GIPSVIVPFS SNIILHPDHP LFADIKLVAQ EPIPIDRRLW RS