Gene Dfer_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3848 
Symbol 
ID8227442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4685122 
End bp4685655 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content50% 
IMG OID644931688 
Producthypothetical protein 
Protein accessionYP_003088217 
Protein GI255037596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.23609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.537793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCG ACGAAATAGT AAACCGGGTA GCCACCAGCG GCATTATCTC GCTGGATTTG 
GAAGAACTTT ACCATCCCGG CGAACGCATT GTTTACGATA TCAAAGACAA CCTCTGGCAG
GGCATGATCC TGCGGGAGAA GGATTTCCGC GACTTCCTGA AAACCCACGA CTGGGCGCAA
TACCAGGGAA AAAACGTGGC GATCATCTGC TCGGAAGACG CCATTGTACC TACCTGGGCC
TACATGCTTC TCGCGGTGCA TTTAGAACCT TACGCGAATG CATTTGTATT CGGTGATTTG
AATGCATTGG AAGACAAGCT TTTCGCCGAC GCTATCGCTA AGTTGAATGC AGAGGAATTT
GCCGGAAAAC GCGTGGTAGT AAAAGGTTGC AGTAAGGTGG AAGTGCCTGT TTCAGCGTAT
GTAGCGGTGA GCAAATTGCT GAAACCCGTT GTGCAGAGCC TCATGTTCGG AGAGCCTTGC
AGTACGGTGC CGCTCTATAA AAAGCCCAAA TCTTCCGTTT CTTCAACCGT CTGA
 
Protein sequence
METDEIVNRV ATSGIISLDL EELYHPGERI VYDIKDNLWQ GMILREKDFR DFLKTHDWAQ 
YQGKNVAIIC SEDAIVPTWA YMLLAVHLEP YANAFVFGDL NALEDKLFAD AIAKLNAEEF
AGKRVVVKGC SKVEVPVSAY VAVSKLLKPV VQSLMFGEPC STVPLYKKPK SSVSSTV