| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3846 |
|---|
| Symbol | |
|---|
| ID | 8227440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 4683516 |
|---|
| End bp | 4684535 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644931686 |
|---|
| Product | von Willebrand factor type A |
|---|
| Protein accession | YP_003088215 |
|---|
| Protein GI | 255037594 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1240] Mg-chelatase subunit ChlD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.341342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.622551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAATT GGTTTTCACT GGAATGGTTC GGGTACAACA CGCTGCGGTC GTATGAATGG
GTTTATCCCT ATTTCTTCTA TTTGCTGCCG CTCGTGCCGT TTTTATTTTG GCTCAGAAAT
GCATTGCATC GCAAGCACAA GCAGCGGCTT ACGATCACTT ACACGTCGGT AACCGGTTTC
CGCAGCTGGC TTACATTGTT GCGATTTGTG CAGCCGATAT GCGTCGGCCT GGCCATTTGC
CTCATTTTGC TTGCATTGGC TCGGCCGCAG GTCGTTTCGG AGCGGAAAGA CCGGTTTTCC
GAAGGCATCG ACATCATGCT GCTGCTCGAC ATTTCCGATT CGATGATCGA GAAAGACCTG
AGCCCGAACC GCCTGGAAGC CGCGAAACGA ATGGCCCGGC AGTTTATCAA AGGCCGCTTG
CAGGACCGCA TCGGGCTGAT CGTATTTGCA GGAGAAGCGG TATCACTTTG CCCGCTCACG
ACTGATTATG AATTACTATA CGGTTTTCTT GATGAGGTAA CGCCCAGCCT CATTCCCACG
CCCGGCACGG CCATCGGCAG TGCGTTGGCC GTGGCGGTAA ACCGCATGCG CGACACGGCG
GGCGAAAGTA AAGTGGCGAT CCTGATCAGT GATGGCGATA ACACGTCCGG CAACCTCGGC
CCCACCACCT CCGCGCAGCT TGCCAATGCA TTCGGGGTGA AAGTGTATAC GATCTCGGTC
GGAAAGCCGA AAAGCGCCTC AAAAGCCGAC ACCACGGCAA GCGCGGGGGC GTTAATGGAC
GAAGGAGAGC TGCAAAATAT TGCGGGAATC GGGAATGGGA AGTATTTTCG TGCTACCGAT
AATACGGCGC TGGAATCGGT TTTCAAACAG ATCGACCAGC TCGAAAAAGT GAAATCACGC
GATGTGCTGT CGCGCGATGT GAAAGATTAC TACCGCGTTT ACCTTTATTG GGCGGTTACA
TTGCTGCTGG TGGCGATTGG GACGAAGAGT ACATTTATGG CCAATATTCT GGAAGATTAA
|
|---|
| Protein sequence | MENWFSLEWF GYNTLRSYEW VYPYFFYLLP LVPFLFWLRN ALHRKHKQRL TITYTSVTGF
RSWLTLLRFV QPICVGLAIC LILLALARPQ VVSERKDRFS EGIDIMLLLD ISDSMIEKDL
SPNRLEAAKR MARQFIKGRL QDRIGLIVFA GEAVSLCPLT TDYELLYGFL DEVTPSLIPT
PGTAIGSALA VAVNRMRDTA GESKVAILIS DGDNTSGNLG PTTSAQLANA FGVKVYTISV
GKPKSASKAD TTASAGALMD EGELQNIAGI GNGKYFRATD NTALESVFKQ IDQLEKVKSR
DVLSRDVKDY YRVYLYWAVT LLLVAIGTKS TFMANILED
|
|---|
| |