| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3829 |
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| Symbol | |
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| ID | 8227423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4668109 |
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| End bp | 4668708 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644931669 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_003088198 |
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| Protein GI | 255037577 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.245837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.241171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAGTTG CCATGTCAGA AACGCTCACG ACTAATGAAT ACACGGACGA TCTTCGTTAT
GAAGTATTTA ACCGCGAGTT CATGCCACAC ATTGACTCCA TGTACAACTT CGCCTTCCGC
CTTACCATGG ATGAAGACGA TGCCAACGAC CTGGTTCAAG ATACTTATCT GAAGGCGTTC
CGTTTTATAT CTTCTTTCGA GCAGGGTACC AATGCGAAAG CGTGGCTTTT CAGGATCCTC
AAAAACAGCT TCATCAACGA CTACCGTAAA AAAAGTAAAG AACCTTCCAA AGTTGATTAT
CAGGAAGTTG AAACGACCTA TAATTCCGAG GAAGCATCCG ATACCACTTA TACCGTAGAC
CTCCGTGCCG ATGCTGTACA GGAACTGATC GGCGATGAAG TTGCTAACGC GCTCAACGCC
CTGCCTGTCG ACTTCAGAAC GGTCATTATT CTCTGCGACA TCGAAGGTTT TACCTACGAG
GAGATGGCCA AAATCCTGGA CATTCCGATC GGAACGGTGA GATCCAGATT GCACCGCGCG
CGTAACCTCC TGAAAGAAAA ACTCAGAAGC TACGCGAGCT CAATGGGATA TGATTCATAG
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| Protein sequence | MLVAMSETLT TNEYTDDLRY EVFNREFMPH IDSMYNFAFR LTMDEDDAND LVQDTYLKAF
RFISSFEQGT NAKAWLFRIL KNSFINDYRK KSKEPSKVDY QEVETTYNSE EASDTTYTVD
LRADAVQELI GDEVANALNA LPVDFRTVII LCDIEGFTYE EMAKILDIPI GTVRSRLHRA
RNLLKEKLRS YASSMGYDS
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