| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3816 |
|---|
| Symbol | |
|---|
| ID | 8227410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 4655626 |
|---|
| End bp | 4656123 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644931656 |
|---|
| Product | 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| Protein accession | YP_003088185 |
|---|
| Protein GI | 255037564 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0054] Riboflavin synthase beta-chain |
|---|
| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0931297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.312522 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAGCG CCGATAAAAA CCTGAGCGTA TTCACCACGG AAGGACTTCC GGATATCAGC
AATAAAAAAT TCGCGATCGT CGTAGCCGAA TGGAACAGCG AAGTGACCGA CAAACTCTTC
GAAGGCGCTT ACCAAACGCT GATCACCTAC GGGGCGCTCC CTGCGAATAT CGTCAGAGGT
AATGTGCCGG GTAGCTTCGA GCTTACCCTA GCCTCGCAAT GGTACGCCCA ACGTGCCGAT
ATCGATGCGG TGATCGCACT AGGCGTGGTA ATCCAGGGCG AAACGAAGCA CAACGATTAC
ATCAACCACG CAGTAGCACA AGGCATTACC AACGTAAGCC TGAAATGCGA TAAGCCAGTA
ATCTTCGGCG TACTGACTCC CAACAACATG GAGCAGGCAC TGGATCGCGC AGGCGGCGTC
CACGGCAACA AAGGCGACGA GGCGGCCATT ACGGCGATTA AGATGATCGG GCTTAAAAAT
TTAATTTTGA ATGATTGA
|
|---|
| Protein sequence | MSSADKNLSV FTTEGLPDIS NKKFAIVVAE WNSEVTDKLF EGAYQTLITY GALPANIVRG
NVPGSFELTL ASQWYAQRAD IDAVIALGVV IQGETKHNDY INHAVAQGIT NVSLKCDKPV
IFGVLTPNNM EQALDRAGGV HGNKGDEAAI TAIKMIGLKN LILND
|
|---|
| |