Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3813 |
Symbol | |
ID | 8227407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4650978 |
End bp | 4652918 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644931653 |
Product | glucosamine-6-phosphate deaminase-like protein |
Protein accession | YP_003088182 |
Protein GI | 255037561 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
TIGRFAM ID | [TIGR00502] glucosamine-6-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.551853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCTT CCAGCAATGG AAAAGGCACC ACCGGCACCA TAGGGCAACC CATTACCTAT GAAAAAATCC CGACGCAGAT TTTTGCCGAT TCGAAAGAGG CGTCCTATGC GGTTGCAAAA GAGATCTCGG ACCTGATCCG TCAGAAACAA AAGGAAGGTA AGCCTTGCGT TCTGGGACTT GCTACGGGTT CTTCGCCAAA GACCGTCTAC GCGATCCTGG TGCGCATGCA CCGTGAAGAA GGTTTGAGTT TTAAAAATGT GATTTCTTTC AACCTGGATG AGTACTACCA AATGGAGCCT GATTCCATTT ACAGCTACCA CCGGTTTATG AAAGAGCAAC TGTTCGACCA CGTCGACATT CCGAAAGAAA ACTATTTCCT GCCGGATGGC ACCGTACCTG CGGCATTGCT CCGTGATTAC TGTGCTTCGT ACGAAAATAA AATCAATGCG GTAGGCGGAC TGGATTTCCA GCTGCTCGGT ATCGGGGGTA ACGGCCACAT CGGTTTCAAC GAACCGGGCT CGCTCATCAA CTCACATACC CGCCTCATCA CCCTCGACCA TTCTACGCGC GCTGCGGCCA GCATGGAATT CGGTGGCTTG CACAATGTAC CGCGCAAGGC AATCACATTG GGTGTGGCGC CTATCCTGAA TGCACGCCGG GTGGTGTTGC TGGCCTGGGG TGAAAGAAAA GCGCAGGTAA TCAAAGGTGC CGTAGAAGGT CCTGTAACCG AGCTGAACCC CGCTTCCTAC CTGCAAGCGC ATGCCGACGT GAGCTTTGTC GTAGATGAAA GTGCTGCTTC CGAACTGACT CGCATTAAGA CGCCTTGGGC GGTGGATTCG GTGATTTGGG ATAATAAAAT GATCAAGAAA GCGGTAACGC ATTTGTCGCA AACCTTGAAA AAACCCATAC TGAAACTGAC CGACAAGGAC TACAACGACA ATGGTATGAG TGACTTGCTG GCACAATATG GTGCTGGTTA TGAGATTAAT ATAAATGTAT TTAACCAATT GCAGCATACC ATCACCGGCT GGCCGGGTGG TAAGCCTAAT GCGGACGATA CGCACCGTCC GGAGCGTGCA CAGCCCGCGA AAAAACGCGT GTTGATTTTC AGCCCGCACC CGGATGACGA TATTATTTCA ATGGGCGGTA CATTCCAGCG CCTCGTCGAT CAGGGTCATG AAGTGCATGT GGCCTACCAG ACTTCGGGTA ACATCGCCGT AGCCGACGAT GAAGCATTGC GTTTCATTGA TTTTGTAGTC GACTTCAACA CTGGCTTCGA CATCGAGAGC CCGAATGCGA ATAAGCTCTT CCTGGATGCA AAGGAATTTT TGAGACATAC CAAAAACAGC GAGATCGATA GCCCCGAGGT TCGTAAGGTG AAAGGCCTGA TCCGCCGTGG TGAAGCGAAA GCTACCTGCC GTTTTGTGGG CATTCCTACC AGCCAGGCGC ATTTCCTCGA CATGCCGTTC TACGAAACCG GCACAGTCCA GAAAAAACCG ATCGGCGAAG AAGATATCAA AATCATCGAA AACCTGATCG AGGAGGTCAA GCCGCACCAG ATCTACGCCG CCGGCGACTT TGCCGATCCG CACGGAACGC ACAAAGTGTG CTGGGACGCG ATCGAAGCCG CATTGCAGCG TTCGAAACAT AAGAATTTCA TGAAAGACTG CTGGGTGTGG TTGTACCGCG GCGCGTGGGC TGAGTGGGAT ATTTATGAAA TCGAAATGGC GGTGCCGATG AGCCCTGACC AGGTGCTGAA AAAACGCCAG GGAATTTTCA AACACCAGTC GCAGAAAGAC GGTGTGGTGT TCCAGGGAGA AGATTCCCGC GAGTTCTGGC AACGTGCGGA GGAGCGCAAC CGCGGCACCG CGCAACTCTA CGATTCCCTC GGCCTGGCCG AGTACGAAGC GATGGAAGCA TTTGTACGCT GGAAGTTCTA A
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Protein sequence | MQASSNGKGT TGTIGQPITY EKIPTQIFAD SKEASYAVAK EISDLIRQKQ KEGKPCVLGL ATGSSPKTVY AILVRMHREE GLSFKNVISF NLDEYYQMEP DSIYSYHRFM KEQLFDHVDI PKENYFLPDG TVPAALLRDY CASYENKINA VGGLDFQLLG IGGNGHIGFN EPGSLINSHT RLITLDHSTR AAASMEFGGL HNVPRKAITL GVAPILNARR VVLLAWGERK AQVIKGAVEG PVTELNPASY LQAHADVSFV VDESAASELT RIKTPWAVDS VIWDNKMIKK AVTHLSQTLK KPILKLTDKD YNDNGMSDLL AQYGAGYEIN INVFNQLQHT ITGWPGGKPN ADDTHRPERA QPAKKRVLIF SPHPDDDIIS MGGTFQRLVD QGHEVHVAYQ TSGNIAVADD EALRFIDFVV DFNTGFDIES PNANKLFLDA KEFLRHTKNS EIDSPEVRKV KGLIRRGEAK ATCRFVGIPT SQAHFLDMPF YETGTVQKKP IGEEDIKIIE NLIEEVKPHQ IYAAGDFADP HGTHKVCWDA IEAALQRSKH KNFMKDCWVW LYRGAWAEWD IYEIEMAVPM SPDQVLKKRQ GIFKHQSQKD GVVFQGEDSR EFWQRAEERN RGTAQLYDSL GLAEYEAMEA FVRWKF
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