| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3810 |
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| Symbol | |
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| ID | 8227404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4647744 |
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| End bp | 4648529 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644931650 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003088179 |
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| Protein GI | 255037558 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.450903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.184474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAGCCA TAACCCCTAC GGTAAGGAAT TTGCTGATTC TGAATATACT TTTCTACTTC
ATAGATTCTT CCGTTTTCAG TCTGAAAGGG CAATTCGCGC TTATGCCGGT GATGTCGCCC
GAGTTCCATA TTTTCCAGTT TGTAAGCTAC ATGTTCCTGC ATGGCGGCAT CGGACACCTT
TTTAGCAACA TGTTCGGTCT GATCATGTTC GGGCCGCTGC TCGAAAGGGT CTGGGGGCCA
AAACGCTTCC TGATATTCTA CTTTGTGACC GGTATCGGCG CGGGGATGCT TTTCTCCGGC
ATAGGGCTAT ATGAAAACTG GCAGGTAGCA CAGGCTGTTG AGTTATTTAC CCAAAATCCG
ACGCCCGACG GCCTGGCCGA CTTCCTGAGC AAACATGCCG AACCACTTTA TGAACCGAAC
CTCGGATTTT TAAATTCTTT CGAAGGAAAT CCAACCAATT CCGTGTATAT TCAACAGAGT
ATTAAGCTGG TACAAGGATA TTACGCCTGG TCTATCAGCA TACCTATGGT CGGGGCCTCG
GGAGCGATTT TCGGGATTCT GATGGCGTTT GGTTTGTTAT TTCCGAATAC GGAGTTGTTT
CTCCTGTTCG TACCGTTCCC GATCAAAGCA AAATATTTCG TTGCTTTTTA CGGGCTTTTC
GAATTGTATT CGGGGATACA AAATGCTCAG TCCGATAATG TTGCCCACTT CGCGCACGTT
GGAGGAATGC TATTTGCATA TATATTGTTG CGTTACTGGG GTACGCAAAA GTCAAATTTC
TATTAG
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| Protein sequence | MLAITPTVRN LLILNILFYF IDSSVFSLKG QFALMPVMSP EFHIFQFVSY MFLHGGIGHL
FSNMFGLIMF GPLLERVWGP KRFLIFYFVT GIGAGMLFSG IGLYENWQVA QAVELFTQNP
TPDGLADFLS KHAEPLYEPN LGFLNSFEGN PTNSVYIQQS IKLVQGYYAW SISIPMVGAS
GAIFGILMAF GLLFPNTELF LLFVPFPIKA KYFVAFYGLF ELYSGIQNAQ SDNVAHFAHV
GGMLFAYILL RYWGTQKSNF Y
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