| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3809 |
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| Symbol | |
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| ID | 8227403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4646820 |
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| End bp | 4647734 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644931649 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003088178 |
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| Protein GI | 255037557 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.199592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAATA TTGTTGACGA CGTTAAGCGG GAATTCGCGA AATCCGAGAA CGCACTTGTT
AAGATTATCC TGGTAAATAC AGCGGTGTTC CTGATCCTGC TGCTCATGAA GATTGTGCTT
ACCCTATCGC AGTCCTCGAA CGTATATGCA TTGGTGATCA ATATGTTACA GCTTCCTGCT
GCCACGCAGG AGTTCATTTA CAAGCCCTGG ACGCTGATCA CCTACTTTTT CACACACGAC
GACATCTTCC ACATTCTGTT CAACATGCTC TTTCTGTACT GGTTCGGGAA ACTGGTAGAT
GAGTATCTGG GTGCCAAAAG AGTAATAGCA CTCTATCTGC TTGGCGGGAT CGCCGGCGGG
CTGATTTACA TTGTATTATA TAACTTACTG CCTTATTTTC AGGCACATAT AGAAGGGTCT
CGCATGCTGG GGGCATCGGC GGCGGCATTT TCGGTGGCGG TAGGCGCGTC CACATTGTTG
CCGAATTATA CTTTTAACCT GATTTTTCTG GGTCCTGTCC GCATCAAGTT CATCGCGCTT
TTTTACATTA TCCTTTCATT GGCCCAAACC GTCGGCCCGA ATGCCGGGGG TAACCTGGCG
CATTTGGGCG GCGCATTCAC CGGTTATGTT TTCATCAAAC TGCTGCAAAA CGGGACAGAT
CTGGGTAAGC CGATCTACGG GTTGCTGTCG GTATGGTCGC GTATTTTCCG CAAACGTCCG
TCCATGCAGG TAACCTACCG CGAACGGCAG GTATACCGCA GCACGAGCGT GTATTCATCG
TCATCATCCG GCACGATCGA AATGCCTGAT CAGATGGAGA TCGATTCGAT CCTCGATAAG
ATTTCCAAAT CGGGCTACGA AAGCCTGACC CGGGAAGAAA AGCAGAAGCT GTTCAAGGCG
AGCCAGCAAA AATAA
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| Protein sequence | MSNIVDDVKR EFAKSENALV KIILVNTAVF LILLLMKIVL TLSQSSNVYA LVINMLQLPA
ATQEFIYKPW TLITYFFTHD DIFHILFNML FLYWFGKLVD EYLGAKRVIA LYLLGGIAGG
LIYIVLYNLL PYFQAHIEGS RMLGASAAAF SVAVGASTLL PNYTFNLIFL GPVRIKFIAL
FYIILSLAQT VGPNAGGNLA HLGGAFTGYV FIKLLQNGTD LGKPIYGLLS VWSRIFRKRP
SMQVTYRERQ VYRSTSVYSS SSSGTIEMPD QMEIDSILDK ISKSGYESLT REEKQKLFKA
SQQK
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