Gene Dfer_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3800 
Symbol 
ID8227389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4625070 
End bp4628390 
Gene Length3321 bp 
Protein Length1106 aa 
Translation table11 
GC content50% 
IMG OID644931635 
Producthypothetical protein 
Protein accessionYP_003088169 
Protein GI255037548 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.562819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGCC TGTTGCTACG CATTCAGGAA TACCGTCAGA AATATTATCA GAACCAGCTG 
CTCAAAGGCG CGATCTTTTC GATCGGTCTG CTACTCACTG TGTTTCTGTT TTTCAATACC
ATCGAATACT TCGGGCGGTT TAGCTCGCTG GTGCGCGGGA TGCTGTTTTT CGGCTTCCTC
GCCGTGCTGG TGTTTTCGTT CGTGCAATGG GTGATCCAGC CATTGATCCA TTTGTATGGG
TTAAGAAAAC CGCTTTCCGA CGAGCAGGCC GCATTGCAGA TCGGGCAGTA TTTTCCTGAG
GTGGGAGATA AGCTCGTAAA TACATTGCAG CTCCGGAATT TGACCGGCAT GCAGTCGGAT
CTCATTGAGG CGAGTATCCG GCAGAAGTCG AGCCAGCTGC TGATTGTCCG CTTTTCGGAT
GCCATTCGTT TTAATGAGAA TAAAAAAAGG CTGAAATACG CGGTGTACCC GCTGGCGGCC
ATTGCGGTGA TTCTGCTTTT TAACCCCTCA TTCTTCTCTT CCAGCTCCGA GCGCATTATC
CATTTCCAGA AGAATTATAC CTATGCTCCG TTCTCATTTG AGGTTCAAAA CAAGAGCTTG
AAAGCATTTC GAAATGAGGA TTTTATATTA AAATTAAAGC TGCAAGGCGA GGCATTACCA
TCGGCCGTTT ACCTGGTGCA AAACGGGACG CGGTTTAAGC TGACGCAGGA AAGCGCCAAG
GATTTTTCCT ACACATTTAA AAACCTGCAG CGCGACGTTG CATTCTCTTT CGACGCGGCG
GGCTATGCTT CGGAACAGTA CCGCATTGTA GTGAACGAAC GACCGTCCCT GCTGTCATTT
GATGTGAATC TGCATTACCC TGCGTATTTG AACAAACCTT CGGAAGGACT GAATAATGTA
GGAAATCTCT CGGTGCCGGA AGGCACGACG ATAGAGTGGA ATTTCAATAC CAATTCTACC
AAAGCACTGG CCATTAAATT TGAAAACGAT TCGGCATTAT ACACCGCAAA AGAGCGTGAC
GGCGATCACT TCGAGATCCG CCGGACAGTC CGAAAATCAG CCCAGTATCA GGTGAACCTG
AAAAACGACC AGACGACCAA TTCTGATAAG ATCGGCTATT TCATCAATGT GATCCCCGAC
AAATACCCGG TGATGAACCT GGAAAATTTC CAGGACACTA CATTGTATAA TTACCTCGTG
CTGGGCGGGT CGATCAGCGA CGATTATGGG TTTTCACAGT TGCGGATGTT CTATTCGGTG
AAAAGAGCGA ACGAAGACAA CCCCGCCGCG CCGAAAAGCA TTCCCATTCC ATTTAACAAA
ACCGTCAATA CCCAGAGCTT CTTTTTCCAA TGGTATGTGG ACAGCCTGCA ACTCGCGCCG
GGCGACAAGA TCGAGTATTA TGCCCAGGTG TGGGATAACG ACGGCGTGAA TGGCGCGAAA
AGCGCGCGCT CGCGGTCGAT CCAGTTTACG GTTCCGTCCA AAGATCAGCT CGAAGCGGAG
GTGAGAAAAT CGGAGCAGGA AACGGAAAAC CAGATGCAGT CGGCGATGAA AAAGGCGCAG
AGCCTGCAAA AGGACATTGA AAACCTGGAT AACCGTTTGA AAAGTAACAA AGAGCTCGAT
TTCAAAGAGC AGAAGCAGAT TGAAGAAGTG CTGCGCAAGC GTGAGGATTT GATGAAGGAA
TTGGAGGCTT TGAAAGAAAA GCATCAGAAC GCAAATGAAA AGGCGCGGCA GTTCAACCAG
CAGAGCCCCG AGTTGCAGGC GAAGATCGAG CAGTTGCAGA AGCTCATGAA CGATCTCATG
GACGAGGACA CCGAAAAGCT GTACAAGGAG CTGAAAAAGT TGTTGGAACA AAAACAGAGC
GAACGGATGT CGACCATGCT CGAAAAGCTC CGCAACAAGG AAAATAACCT CGAGAAAGAA
CTGGAACGGA CGATGAAGCT CTTCAAGCAA ATGCAGATGG AGCAGAAAAT GGAAAACCTG
GCCGAAAAAC TGAACGATCT GGCGGATAAG GAAGAAGAAC TCGCCGAAAA ATCGGAACAG
AACGATAAGA ACAAGAACGC CGACGATAAG CAAGGCAAAA ACCAGGACTT GAAAAAGCAG
CAGGAACAGA TCCAGAACGA TTTCAAAAAA GCCCAGGAAA ACAGCAAGGA GCTGGAAGAA
ATGGCGATGG AGCTCGAACA GCAACTCGAC ACGAAGGAAG AGGAGCAAAA AAACGCTTCT
GAGCAGATGG AACAGAGCAA GCAGCAGCTC GACAAGCAAC AGAACCAGAA AGCATCCCAG
AGCCAAAAAA ATGCGGCAAA ATCGATGAAG AAAATGGCGC AGTCGATGCA GGAAAATATG
GAGTCTGCTG AAATGGAGCA GATGCAGGAA AATATGGACG CATTGCGAGA CATTCTGGAA
AACCTGATCA CATTATCCTT TGATCAGGAG ACCCTGATGA AAGACTTCCG CGGCGTGAGC
CTGCAAGACC CGCGCTTTGT GAAACTCGGC CAGCAACAGC TGAAACTGAA AGACGACGCG
AAGATCGTCG AGGATAGCCT GTATGCATTG GCCAGCCGCG TGGTGCAGAT CCAATCGTTC
ATCACGCGCG AGCTGAATGA CATGAAATCG TACATGAACG AAAGCGTGAA GAGCATCAAG
GACCGGCAGA TCAATGTAGC GACCTCGAAG CAGCAATTTG CGATGACGTC CATGAACAAC
CTCGCCTTAA TGCTGAGCGA CGTGTTTAAC CAAATGCAAC AGCAAATGGC GATGGCCATG
CCCGGCGCCG GCAAGGGCAA AAAGGGCAAG CAGAAAGGCG ACCAGCCAAG CCCCGGCGAA
ATGCAGCAGC AACTGAACGG CCAGATGAAG CAACTCGGGC AGGGTAAGGA AGGGCAGGGT
AACCAGTCGG AACAGCTCGC CAGAATGGCC GCGCAGCAGG CCGCGATCCG TAAGATGATC
CAGCAATTGA TGGAGCAGCA GAAAGGCACG GAGCAGGGCA AGCAGTTCGG CAAGGAATTG
CAGGATATCT CCGACAAGAT GGATGAAACC GAAACCGACC TGGTTAACAA ACGAGTGACG
CCGGAGCTGA TCAAGCGCAA CCAGGAGATC ACCACGCGTC TGCTGGAATC GGAGCGGGCG
ATGAAAGAGC AGGACGAAGA CGAGCAGCGC AAAGCCCAAA GCGCGAAGCA GCAGCCAAAA
CAACCGCCGG CAGCATTCGA AAAGTACATT CGTGAGAAGG AGAAGCAAAC CGAGCTGCTC
CGCACGATTC CTCCGACATT CTCACCATTC TACAAGCGTG AGGTAGACAC CTACTTCCGT
AAATATCAGG CCAAGAACTG A
 
Protein sequence
MEGLLLRIQE YRQKYYQNQL LKGAIFSIGL LLTVFLFFNT IEYFGRFSSL VRGMLFFGFL 
AVLVFSFVQW VIQPLIHLYG LRKPLSDEQA ALQIGQYFPE VGDKLVNTLQ LRNLTGMQSD
LIEASIRQKS SQLLIVRFSD AIRFNENKKR LKYAVYPLAA IAVILLFNPS FFSSSSERII
HFQKNYTYAP FSFEVQNKSL KAFRNEDFIL KLKLQGEALP SAVYLVQNGT RFKLTQESAK
DFSYTFKNLQ RDVAFSFDAA GYASEQYRIV VNERPSLLSF DVNLHYPAYL NKPSEGLNNV
GNLSVPEGTT IEWNFNTNST KALAIKFEND SALYTAKERD GDHFEIRRTV RKSAQYQVNL
KNDQTTNSDK IGYFINVIPD KYPVMNLENF QDTTLYNYLV LGGSISDDYG FSQLRMFYSV
KRANEDNPAA PKSIPIPFNK TVNTQSFFFQ WYVDSLQLAP GDKIEYYAQV WDNDGVNGAK
SARSRSIQFT VPSKDQLEAE VRKSEQETEN QMQSAMKKAQ SLQKDIENLD NRLKSNKELD
FKEQKQIEEV LRKREDLMKE LEALKEKHQN ANEKARQFNQ QSPELQAKIE QLQKLMNDLM
DEDTEKLYKE LKKLLEQKQS ERMSTMLEKL RNKENNLEKE LERTMKLFKQ MQMEQKMENL
AEKLNDLADK EEELAEKSEQ NDKNKNADDK QGKNQDLKKQ QEQIQNDFKK AQENSKELEE
MAMELEQQLD TKEEEQKNAS EQMEQSKQQL DKQQNQKASQ SQKNAAKSMK KMAQSMQENM
ESAEMEQMQE NMDALRDILE NLITLSFDQE TLMKDFRGVS LQDPRFVKLG QQQLKLKDDA
KIVEDSLYAL ASRVVQIQSF ITRELNDMKS YMNESVKSIK DRQINVATSK QQFAMTSMNN
LALMLSDVFN QMQQQMAMAM PGAGKGKKGK QKGDQPSPGE MQQQLNGQMK QLGQGKEGQG
NQSEQLARMA AQQAAIRKMI QQLMEQQKGT EQGKQFGKEL QDISDKMDET ETDLVNKRVT
PELIKRNQEI TTRLLESERA MKEQDEDEQR KAQSAKQQPK QPPAAFEKYI REKEKQTELL
RTIPPTFSPF YKREVDTYFR KYQAKN