Gene Dfer_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3799 
Symbol 
ID8227388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4624084 
End bp4624824 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content53% 
IMG OID644931634 
Producthypothetical protein 
Protein accessionYP_003088168 
Protein GI255037547 
COG category 
COG ID 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA CTATTTGCTT ACTCATCGTC CTCATATGCA GCGTATATAC GCCGGCATCC 
GCTCAGTTCA ATTTCGACGT CGAAGGCGGC CTCATTTTGG GCACCAGTTA CAATAAAGTA
CAAATTCCGA GCGGAACCGG AACGCGCGTG AATCTCCCAG ACGAACTGAA ACTGGACCAG
AGTGCGTTCT ATCGTATTCG TGCGGGGTAC CGGATCGGTA ACCGGCACAA CATCTCCGCG
TTGTTCGCAC CGCTCACGAT CCACTACCGC GGGTCGCTCG ATCAGAGCAC AAATTTCAAC
AACAACACCT TTCTCCCCGG CCAGCCGCTC AATGTCGACT ACCGGTTCAA CTCGTACCGG
CTTACCTATC GCTACGATTT TTTTGCCAAT GGCAAGTGGC GGGTAGGGGC GGGGCTCACC
GGCAAGGTCC GCGATGCCGA CATCCGTTTT AAGAGCGAGT ACGCCGATAC GCATTACGAC
AACCTCGGCT TTGTGCCGCT CATTAATTTT TACGCTTCCT GGAAACCGGC CTATCACTGG
ACCATCATCC TCGAGGGCGA CGCACTCGCA GCGAAGCAGG GACGCGCCGA GGATATCTTC
GGCGGCATTG CCTATAACTT CAATAATACC GTTGGCATCA AGCTCGGCTA CCGCATGCTC
GAAGGCGGGG CGGACAATGA CAAGATTTAT AATTTCAACT GGATCAACTA TGCATCGGCT
GGGTTACTGA TTTCGCTGTA A
 
Protein sequence
MKTTICLLIV LICSVYTPAS AQFNFDVEGG LILGTSYNKV QIPSGTGTRV NLPDELKLDQ 
SAFYRIRAGY RIGNRHNISA LFAPLTIHYR GSLDQSTNFN NNTFLPGQPL NVDYRFNSYR
LTYRYDFFAN GKWRVGAGLT GKVRDADIRF KSEYADTHYD NLGFVPLINF YASWKPAYHW
TIILEGDALA AKQGRAEDIF GGIAYNFNNT VGIKLGYRML EGGADNDKIY NFNWINYASA
GLLISL