Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3760 |
Symbol | |
ID | 8227346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4574697 |
End bp | 4575407 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644931592 |
Product | ABC transporter related |
Protein accession | YP_003088129 |
Protein GI | 255037508 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.676355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA TAGAAACCAG CGAGATCGCC AAACGTTACG TCATGGGCAG CGAAATCATC CAGGCGCTCA AATCCGTCAC GATTTCGGTG AACAAGGGCG AATATGTGGC ATTTATGGGG CCGTCGGGTT CCGGCAAATC CACGCTGATG AACATTATCG GCTGTCTGGA CACGCCAACG ACCGGGAAAT ACATCCTGAA CAACAAGGAC GTGAGCGATA TGACCGAAAA CGAGCTGGCC GAGATCCGGA ATAAGGAAAT AGGCTTCGTT TTTCAGACAT TTAACCTCTT GCCGAGGATG TCGTCGCTGG ATAATGTGGC ATTGCCGCTC ATTTACGCAG GATTGAGCAA GGCGGACAGG ACCGAAAAAG CCATGCAATC CCTCAAAAAT GTGGGCCTTG AAAACCGGGC CGGGCACAAG CCCAATGAAC TGTCGGGCGG CCAGCGCCAG CGTGTGGCGA TCGCACGGGC GCTTGTGAAC GATCCCAGCA TCCTGCTCGC CGATGAACCA ACCGGTAACC TCGACACCAA AACGTCCTAC GAAATCATGG ACCTTTTCGA CCAACTGTAC AGCAAAGGCA ACACGATCGT GATGGTAACG CACGAAGAGG ACATCGCGCA TTACGCGCAC CGCATCGTCC GCCTGCGCGA CGGCCTCGTG GAGTCGGACA CGATCAATCC GAACCCTACG AAGGTGAGTG CGCTCGTTTG A
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Protein sequence | MKIIETSEIA KRYVMGSEII QALKSVTISV NKGEYVAFMG PSGSGKSTLM NIIGCLDTPT TGKYILNNKD VSDMTENELA EIRNKEIGFV FQTFNLLPRM SSLDNVALPL IYAGLSKADR TEKAMQSLKN VGLENRAGHK PNELSGGQRQ RVAIARALVN DPSILLADEP TGNLDTKTSY EIMDLFDQLY SKGNTIVMVT HEEDIAHYAH RIVRLRDGLV ESDTINPNPT KVSALV
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