Gene Dfer_3760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3760 
Symbol 
ID8227346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4574697 
End bp4575407 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content54% 
IMG OID644931592 
ProductABC transporter related 
Protein accessionYP_003088129 
Protein GI255037508 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.676355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA TAGAAACCAG CGAGATCGCC AAACGTTACG TCATGGGCAG CGAAATCATC 
CAGGCGCTCA AATCCGTCAC GATTTCGGTG AACAAGGGCG AATATGTGGC ATTTATGGGG
CCGTCGGGTT CCGGCAAATC CACGCTGATG AACATTATCG GCTGTCTGGA CACGCCAACG
ACCGGGAAAT ACATCCTGAA CAACAAGGAC GTGAGCGATA TGACCGAAAA CGAGCTGGCC
GAGATCCGGA ATAAGGAAAT AGGCTTCGTT TTTCAGACAT TTAACCTCTT GCCGAGGATG
TCGTCGCTGG ATAATGTGGC ATTGCCGCTC ATTTACGCAG GATTGAGCAA GGCGGACAGG
ACCGAAAAAG CCATGCAATC CCTCAAAAAT GTGGGCCTTG AAAACCGGGC CGGGCACAAG
CCCAATGAAC TGTCGGGCGG CCAGCGCCAG CGTGTGGCGA TCGCACGGGC GCTTGTGAAC
GATCCCAGCA TCCTGCTCGC CGATGAACCA ACCGGTAACC TCGACACCAA AACGTCCTAC
GAAATCATGG ACCTTTTCGA CCAACTGTAC AGCAAAGGCA ACACGATCGT GATGGTAACG
CACGAAGAGG ACATCGCGCA TTACGCGCAC CGCATCGTCC GCCTGCGCGA CGGCCTCGTG
GAGTCGGACA CGATCAATCC GAACCCTACG AAGGTGAGTG CGCTCGTTTG A
 
Protein sequence
MKIIETSEIA KRYVMGSEII QALKSVTISV NKGEYVAFMG PSGSGKSTLM NIIGCLDTPT 
TGKYILNNKD VSDMTENELA EIRNKEIGFV FQTFNLLPRM SSLDNVALPL IYAGLSKADR
TEKAMQSLKN VGLENRAGHK PNELSGGQRQ RVAIARALVN DPSILLADEP TGNLDTKTSY
EIMDLFDQLY SKGNTIVMVT HEEDIAHYAH RIVRLRDGLV ESDTINPNPT KVSALV