Gene Dfer_3755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3755 
Symbol 
ID8227341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4570761 
End bp4571447 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content50% 
IMG OID644931587 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_003088124 
Protein GI255037503 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0435516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCA CCATCCCGAT TTTCACGTTT ATATTTTTGT GCTGCATGGC CCTGGTGTCG 
TGCGCACAGT CTGACAAAAA ACACAAGAGC AAAATGGACA AAGAAACAGC CTCAACTGCA
TTGGACGAAA GCAACGTCGA TACTGCGAAT ACGGAAATCG CGACATTTGG CACAGGGTGT
TTCTGGTGTA CCGAAGCCGT GATGGAGTCA CTCGACGGCG TCAAAAAGGT GGTTTCGGGC
TACTCGGGCG GGCATGACCC CAATCCCAGC TACAAAGCGG TGTGCACAGG CACCACAGGC
CACGCCGAAT GTGTGGAAGT GACCTACGAT CCCAAGGTGA TCAGCTATGC CGAGCTGCTC
GAAGCATTTT TCCGCAGCCA CGACCCTACT ACGCTGAACC GCCAGGGCAA CGACGTGGGA
ACGCAATACC GTTCAGTCAT TTTTTACCAC ACCGACGACC AGAAACAACT CGCCGAAACG
GCCAAAGCTG AACTGGACAA ATCGGGCGCT TATGCGAATC CGATTGTCAC CGAAATCACT
AAATCTCAGA AGTTTTACCC TGCGGAAGAT TACCACCAGA ATTATTTTGC CAACAATCCC
GAGCAGGGCT ACTGCGCCTT TGTGATTGCA CCAAAACTGG ATAAATTTAA AAAGGTATTT
AAAGATAAGC TCCGCAAGCA GATCTGA
 
Protein sequence
MRTTIPIFTF IFLCCMALVS CAQSDKKHKS KMDKETASTA LDESNVDTAN TEIATFGTGC 
FWCTEAVMES LDGVKKVVSG YSGGHDPNPS YKAVCTGTTG HAECVEVTYD PKVISYAELL
EAFFRSHDPT TLNRQGNDVG TQYRSVIFYH TDDQKQLAET AKAELDKSGA YANPIVTEIT
KSQKFYPAED YHQNYFANNP EQGYCAFVIA PKLDKFKKVF KDKLRKQI