Gene Dfer_3731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3731 
Symbol 
ID8227316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4541603 
End bp4542199 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content47% 
IMG OID644931563 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_003088101 
Protein GI255037480 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID[TIGR02727] 5,10-methenyltetrahydrofolate synthetase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.916897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.452203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG CGGCATTGCG CAAGGAGTTT TTACAAAAAA GAAAGGAGGC CGACGGGCAA 
TGGCTGATCG AAAAAAATGC CCTCATTGCG CAGAATCTGG AAAAATACGT TCAGCAAAAT
CATTTCAAAA CACTCCACAC CTTCCTGCCG CAACTCGGCT CGCGCGAAAT CGACACCTTT
TTCATTATTG AGTCGTTCCG CATTGCATTT CCTGCCATGC GCATTGCAGC ACCCTACATT
GTTCCCGGCA CGCGTGAAAT GGAGCATTAT TTGGTAACGC CTTCCACGCA TTTGGTTTTA
AATCAATGGA AAATTCCTGA ACCTGACCCA TTGACTGCTG AAAAAATACG ACCCGAAGAA
ATCGACATTA TACTGGTACC GCTTCTCGCG TTCGACCGCA AAGGTTACCG AGTCGGTTAT
GGCGGCGGCT ATTACGACCG CTTTTTGCCT CAAACCCGCC CTGATTGCAT CAAAATAGGC
CTTTCCCTCT TTGAAGAAGT GGAGGCGATA GAAGATATCG ATGGTTACGA CATTCCGCTC
GACGCGTGCA TCACACCAGG AAGATTGTAT GATTTCAAAA ATCTGAAAGC CTATTAA
 
Protein sequence
MKKAALRKEF LQKRKEADGQ WLIEKNALIA QNLEKYVQQN HFKTLHTFLP QLGSREIDTF 
FIIESFRIAF PAMRIAAPYI VPGTREMEHY LVTPSTHLVL NQWKIPEPDP LTAEKIRPEE
IDIILVPLLA FDRKGYRVGY GGGYYDRFLP QTRPDCIKIG LSLFEEVEAI EDIDGYDIPL
DACITPGRLY DFKNLKAY