| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3730 |
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| Symbol | |
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| ID | 8227315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4540275 |
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| End bp | 4541486 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644931562 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_003088100 |
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| Protein GI | 255037479 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.377053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.509071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA TTAAAGTTGA CAATCCCGTC GTAGAGCTGG ATGGCGATGA AATGACCCGC
ATCATCTGGA AGTTTATCAA GGAAAAACTG ATCCTCCCTT ACATCGATGT AGATATCAAA
TACTACGATT TGGGTATCGA GTACCGCGAC GAGACCAATG ATCAGGTGAC CATCGATGCT
GCCAACGCTA TCAGAGAATA CGGCGTGGGT ATCAAATGTG CAACCATCAC ACCTGACGAA
GCCCGTGTTG AAGAATTCGG TCTGAAACAA ATGTGGAAAT CGCCAAACGG AACCATCCGT
AACATCCTCG ATGGTACTGT GTTCCGTGAG CCGATCGTAA TGCAAAATGT GCCGAGACTA
GTTACCAACT GGACAGCGCC AATTATCGTA GGACGTCACG CATTTGGTGA CCAATACCGC
GCTACCGACT TCGTGGTACC TGGAAAAGGT AAACTGACGA TCAAATTCGA AGGCGAAGAC
GGACAAGTGA TCGAGCACGA AGTGTACCAG TTCAAAGGTG CAGGTGTAGC GATGGGTATG
TACAACATCG ACGAGTCGAT CCGCGGCTTC GCGCGTTCAT GCTTTAATGT GGCTTTGGAC
AAAGGATGGC CATTGTACCT TTCTACCAAA AACACGATCC TTAAAAAATA CGACGGCCGC
TTCAAGGATA TTTTCCAGGA AGTGTACGAA AACGAATACA AAGGAAAAGT ACATTACGAG
CACCGTCTGA TCGACGACAT GGTGGCTTCC GCATTGAAAT GGGAAGGTAA CTTCGTATGG
GCTTGTAAAA ACTACGACGG TGACGTTCAG TCGGATACCG TTGCGCAAGG TTTCGGTTCA
CTGGGTTTGA TGACTTCAAC TTTGGTTACG CCGGATGGCA AAGTAATGGA AGCTGAGGCA
GCACACGGAA CAGTAACCCG CCACTACCGC GAGCACCAGA AAGGCAAGCC AACTTCCACT
AACCCAATCG CTTCCATCTT CGCATGGACC CGCGGCCTGG CGTTCCGTGG TAAGCTGGAC
AACAACCAGC CGTTGATCGA TTTCGCTAAC GCTTTGGAAA AAGTGTGTAT CGAAACTGTG
GAAAGTGGAA AAATGACCAA GGATTTGGCT GTTGGTCTGC ACGGAAACGA TGTGAAACAT
GGTGATCACT ACCTGTACAC AGAAGAGTTC CTAGAAGCGA TCGACGAGAA TTTGAAAGCT
GCATTGGCAT AA
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| Protein sequence | MSKIKVDNPV VELDGDEMTR IIWKFIKEKL ILPYIDVDIK YYDLGIEYRD ETNDQVTIDA
ANAIREYGVG IKCATITPDE ARVEEFGLKQ MWKSPNGTIR NILDGTVFRE PIVMQNVPRL
VTNWTAPIIV GRHAFGDQYR ATDFVVPGKG KLTIKFEGED GQVIEHEVYQ FKGAGVAMGM
YNIDESIRGF ARSCFNVALD KGWPLYLSTK NTILKKYDGR FKDIFQEVYE NEYKGKVHYE
HRLIDDMVAS ALKWEGNFVW ACKNYDGDVQ SDTVAQGFGS LGLMTSTLVT PDGKVMEAEA
AHGTVTRHYR EHQKGKPTST NPIASIFAWT RGLAFRGKLD NNQPLIDFAN ALEKVCIETV
ESGKMTKDLA VGLHGNDVKH GDHYLYTEEF LEAIDENLKA ALA
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