Gene Dfer_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3712 
Symbol 
ID8227297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4521112 
End bp4521834 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content52% 
IMG OID644931544 
Productlipoate-protein ligase B 
Protein accessionYP_003088082 
Protein GI255037461 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCC TGATCAATAA AAAAGTGCAG TTCCGGGATC TTGGCCTGAT CGATTATCAG 
GAGGCATGGG ATTATCAGGA GAAGATTTTC GCTGAGACAC TGGCGATTAA AACGCAAAAC
CGGTCGCTCG ATGCGGAAAA CCAGCAGCTA ACCCCGAATT TCCTGCTTTT CTGCCAGCAC
CCGCATGTGT ATACGTTGGG GAAAAGCGGC AAGCCGGACC ATCTGCTGCT CGACGAAGAC
GACCTGGCGG CCAGGCAGGC CAAATATTAC AAGATCAACC GCGGCGGGGA CATTACCTAC
CACGGACCGG GGCAGATCGT CGGATACCCG ATCCTCGACC TGGACAATTT TTTCACGGAC
ATTCACGTGT ATATGCGTAC GCTTGAAGAG GCGATTATCC TGACGCTGGC CGAATATGGC
TTGCAAGCGG GCCGCATTGC AGGACTAACG GGCGTTTGGC TTGATTTTGA GGAACAGAAA
AATCCGAGGA AAATTTGCGC GCTGGGCGTG AAGGCAAGCC GCTGGGTGAC CATGCACGGT
TTCGCCCTGA ATGTGAATAC GGATTTATCC TATTTCGGAA ACATCGTCCC ATGCGGGATC
GACGACAAGG CGGTTACCTC GCTCGCCGCG GAATTGGGCA GGGAAGTCGA TTTAGAGGAA
GTTTCAATTA AATTAAAAAA CCATCTGGCG CATTTGTTCA GCATGGAATT GCAAGTAGCG
TAA
 
Protein sequence
MNTLINKKVQ FRDLGLIDYQ EAWDYQEKIF AETLAIKTQN RSLDAENQQL TPNFLLFCQH 
PHVYTLGKSG KPDHLLLDED DLAARQAKYY KINRGGDITY HGPGQIVGYP ILDLDNFFTD
IHVYMRTLEE AIILTLAEYG LQAGRIAGLT GVWLDFEEQK NPRKICALGV KASRWVTMHG
FALNVNTDLS YFGNIVPCGI DDKAVTSLAA ELGREVDLEE VSIKLKNHLA HLFSMELQVA