| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3707 |
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| Symbol | |
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| ID | 8227292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4516141 |
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| End bp | 4519047 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931539 |
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| Product | membrane-bound dehydrogenase domain protein |
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| Protein accession | YP_003088077 |
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| Protein GI | 255037456 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | [TIGR02603] putative heme-binding domain, Pirellula/Verrucomicrobium type
[TIGR02604] putative membrane-bound dehydrogenase domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA CCAGTACATT GCCGCTTAGC AAATCGGTTC TTTTCGCGGG AAGCATCCTG
CTGGTTTCGC TTCTCAGGGC CATGTGGCAG CCCCCGGCAC CCGAAAGTCC CCGGCAATCG
GCGGTTTCCG CGGTAGCGGA TGATTCTTCT CGGCTGTACC TGCCCGACGA CCTCGAAGCT
ACATTATGGG CCGAGGCGCC GATGTTTTAT AACCCGACCA ACATGGATAT CGACGCCAAA
GGCAGGGTCT GGATCACTGA GGCGGTGAAT TATCGCGATT TTAACACAAA GCCCGCCGAA
CGCCTCAGTC ACAAGCAGAA AGGCGACCGG GTAATGATCC TCGAAGACAA GGATGGCGAC
GGCAAGGCCG AATCCGCCAA AGTGTATGTG GAAGATTCAT TGCTGACGGC ACCGCTCGGC
ATTGCGGTCA TTGGCAACAA AACCATCGTT TCCTGCGCGC CTAACCTGCT CATTTATACC
GATACGGATG GTGACGACAA GCCCGATAAG CGCGAGGTAT TCCTGACCGG CTTCGGCGGC
TTCGACCACG ACCATTCCCT GCATTCATTG ATCGTCGGGC CGGATGGAAA GTATTATTTC
AACACCGGCA ATGCCGGGCC GCACAAAGTT ACCGATAAAG GCGGCTGGAC ACTGCGGAGC
GGCAGCCTTT ACACCGGCGG AACGCCCTAT AACAAACAGA ATGAAGGCAA TCAAAAGTCG
GACGACGGCC GGATCTGGGT CGGCGGCCTT GCGTTGCGTA TTAATCCCGA CGGAACGGGC
CTGAAAGTGC TCGGGCATAA TTTCCGGAAC AGTTACGAAG TATGCCTCGA CAGCTACGGC
AATATGTGGC AGAACGATAA CGACGACCAG GTGATCACAT GCCGCGTCTC GTTTTTGCAG
GAAAATGGCA ATGCGGGCTA TTTTTCCTCA GACGGTAGCC GCTACTGGCA GGCCGACCGC
CGCCCGGGGC AGGACATTTT CACTACGCAT TGGCATCAGG AAGACCCGGG CGTGATGCCC
GCCGGGGACA ACTCGGGCGC TGGCTCTCCC ACCGGGATCG TGTTTTATGA AGGCGATGAA
TTGGGGGAAA ATTACCGCGG CACATTGCTG AGCTGCGAAG CGGGGCGGAA TGTGATTTTC
GCTTATCAGC CCCAGCCGCA GGGCGCGGGT TTCGCGCTCA ACCGCCGCGA CCTCATCAGC
TCTTTTCCCC GCGTCTCGGA ACGCTACGAA TGGTACGAAA CCGACCAGGA TTATCGCAAA
TGGTTCCGGC CGTCGGATGT GGCGGTAGGG CCGGACGGCG CCATTTACAT TGCCGACTGG
TACGATCCCG TGGTAGGAGG GCATGCCATG AAAGATAAGA AAGGCTACGG CCGCATTTAC
CGCATTACGC CCAAAGGAAA GAAACTCATC ACGCCTAAGC TCGATTTTTC CACAACCGCC
GGACTGTTGG ATGCCTTGAA AAGCCCCGCT ATCAACGTGC GATCGCTTGG TTTTGAAGGA
TTAAAGGCGA AGGGCGAGGC GGTTTTGCCG GAAGTGAAGC AGCTACTGGC CGCCGAAAAC
CCCTATCACC AGGCCCGGGC GATCTGGCTT ATGGCGCAAT TGGGCGAACA AGGCAATGCG
GAGGTGGTGA AATTATTGTC GTCACCCAAC GCAATGCACC GGCTTACGGC ATTCCGTGCA
TTGAAATCGA TGAATAAGAC AATTGCATTT TTAGAGCAAG TGTCCAAAGA TGCGGACGCA
TCCGTGCGGC GGGAGGTAGG GATCGCATTG CGGGATTTAT CATACGATCA GGCATTTGAG
AGTATATCAA ACCTTATCAA AAATTACGAC GGTAAAGATC CCTGGATGCT GGAAGCAATT
GGGACGGCGG CAGACGGAAA AGAAGCGGAT GTTTACACCT ATGTCCGTGA AGCATTGAAA
GCAGACCCAA TTCACTGGGA CTCGCGGCGG GCAAATCTTA CCTGGCGTTT GCATCCGGTA
ATAGCCCTGG ACGAGTTAAA AGCAAGGGCC GCCTCACCCA AAGTGGCCGA GCCGGAGCGT
CGCAAAGCAT TGACAGCCAT TGGTTTTATC AAAAATAAGA AAGCCGCTGA GGCGATGGTC
GCATTGTCGA AATCCACCTT GCCGGATGTG GCTTCGCAGG CTTCATACTG GATCAATTTC
CGGAAAAGCA ATGATTGGGC CGGGTTGATG AACTGGGAAG AAACGACTGC CCAGGCGATA
ACGCCCGCCT ACCAACGCAT GCTCAACCTG AAAAAGACCG TAGCCGACAA AACCCAACCC
ATTTCCCAGC GCATCGAAAC AGCCAGGAAA ATGGCCTCGG ATGCGAACGG AGGCAATATA
CTTGTGGATA TGCGCGTGCA AGGCCAGCTG CCCGACACCA TAGCGAGGTC GGTGAGCGAG
ATTATTTTCA AAAACCACGA CCAGAATGTG CGCGTGGTCG CCAGCCAGTT CTTCCCGCGA
AACGGGAAGG TTTTAAAAAC CGATTTTATT TCCAGAATGC ACGCCGATCC CTCAAATGGC
GAGAAGCTGT TTTCGACCAT CTGTGCGGCT TGCCACAAGC ACGGCAGCAA AGGCGCGGAA
ATAGGGCCGG ACCTCACGAC CATTCATAAA AAGTTCGACA AGGCGGCCTT GCTGGATGCC
ATTATCAACC CGTCGGCGAG TATGGTTTTC GGCTATGAAA GCTACACGAT CGTTACCAAA
AAGGGCGAAA CCTACTTCGG ATTTCTCATG AGCGACGGCG CGACTGTGGT GCTGAAAGAC
GCAGCAGGCC AGCAGCACAC GATCAAGGCC GATCAAATTA AAACCCGGGA GAAAATGCCC
TCTTCGCTCA TGCCGGAGCC CACCGCGCTG GGCCTGAACG AGCAGGATCT GGCCGATTTG
ACGGGCTATC TTTTGAATTT CAAGTGA
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| Protein sequence | MNITSTLPLS KSVLFAGSIL LVSLLRAMWQ PPAPESPRQS AVSAVADDSS RLYLPDDLEA
TLWAEAPMFY NPTNMDIDAK GRVWITEAVN YRDFNTKPAE RLSHKQKGDR VMILEDKDGD
GKAESAKVYV EDSLLTAPLG IAVIGNKTIV SCAPNLLIYT DTDGDDKPDK REVFLTGFGG
FDHDHSLHSL IVGPDGKYYF NTGNAGPHKV TDKGGWTLRS GSLYTGGTPY NKQNEGNQKS
DDGRIWVGGL ALRINPDGTG LKVLGHNFRN SYEVCLDSYG NMWQNDNDDQ VITCRVSFLQ
ENGNAGYFSS DGSRYWQADR RPGQDIFTTH WHQEDPGVMP AGDNSGAGSP TGIVFYEGDE
LGENYRGTLL SCEAGRNVIF AYQPQPQGAG FALNRRDLIS SFPRVSERYE WYETDQDYRK
WFRPSDVAVG PDGAIYIADW YDPVVGGHAM KDKKGYGRIY RITPKGKKLI TPKLDFSTTA
GLLDALKSPA INVRSLGFEG LKAKGEAVLP EVKQLLAAEN PYHQARAIWL MAQLGEQGNA
EVVKLLSSPN AMHRLTAFRA LKSMNKTIAF LEQVSKDADA SVRREVGIAL RDLSYDQAFE
SISNLIKNYD GKDPWMLEAI GTAADGKEAD VYTYVREALK ADPIHWDSRR ANLTWRLHPV
IALDELKARA ASPKVAEPER RKALTAIGFI KNKKAAEAMV ALSKSTLPDV ASQASYWINF
RKSNDWAGLM NWEETTAQAI TPAYQRMLNL KKTVADKTQP ISQRIETARK MASDANGGNI
LVDMRVQGQL PDTIARSVSE IIFKNHDQNV RVVASQFFPR NGKVLKTDFI SRMHADPSNG
EKLFSTICAA CHKHGSKGAE IGPDLTTIHK KFDKAALLDA IINPSASMVF GYESYTIVTK
KGETYFGFLM SDGATVVLKD AAGQQHTIKA DQIKTREKMP SSLMPEPTAL GLNEQDLADL
TGYLLNFK
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