| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3704 |
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| Symbol | |
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| ID | 8227289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4510375 |
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| End bp | 4513761 |
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| Gene Length | 3387 bp |
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| Protein Length | 1128 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931536 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003088074 |
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| Protein GI | 255037453 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCATGA AAATAACATT TGCCCAAATC CTTTTTGCAG TGGTTTTCAC GACGCTCACC
CACGCTGCCA GCGAGGGAAG GGCGCAGGAA GTCATGGAGA GATTGGTGAC GATCCATGCG
CAGAATGCGG AACTGAGAAA TGTCCTGCGC GACATCGAGG AGCAGGCCGA CGTCAAGTTT
GCGTACAGCC AGAAAAGCAT CCGCGCGGAG CGTACCGTGG ATGTGCATAT CAACCGGCAG
AAGCTGTCGA CGGTATTGAG CACGCTGCTC GATCCGCTGC ACATTGCCTA TGAACTAACG
GCCGGGCGCA TTTTGCTAAC GGCCGAAACC GGCGCAGTAG CGGAGCCGCA GCAGCCGGAA
CCCGCACAAG CGGCCGCCGC GCAAGCCCTC GCACAGGTGA AAGGAAAGGT GATCGACGAA
AACAATGCGG GCCTGCCCGG CGTGAGCGTG ATCATCAAAG GCACACAAAA AGGCACCACT
ACGGACCAGG AAGGCGCATT CGCGCTCGAC GTGATCGAAC AGAATGCCGT GCTGGTGTTC
AGTTTTGTAG GTTATAAACC GCAGGAGGTG ACCGTTGGCG GGCAAACGAA CTTATCCGTG
ACCATGCAGC CGGATAACCA GGCGCTTGAA GAAGTGGTGG TGGTGGGTTA TGGATCGGTG
CGGAAGAGTG ATCTGACGGG CTCGGTGGCG AGCATTAAGG GCGACGCGAT CCGGGAAATG
CCTGTGACGT CGGTGGACCA GGCGATCCAG TCGAGGGCGC CCGGTGTGCA GGTAACGCAA
ACTTCCGGCG CTCCGGGCGG TGGCATTTCC ATCCGCGTGC GCGGTGCCAA CTCCATCAAC
AGCGGCAGCG AGCCGCTTTA CGTGATCGAC GGCTTCCCGA TTTACCCCGA TAACGGCGCA
TTGGGAACCA GCGGTAACCG GCAGCCTACC AATGCGATGG CGACCATTAA CCCCAACGAA
ATCGAATCCA TTGAAATACT CAAAGATGCC TCCGCAACCT CCATTTACGG CTCGCGCGGT
GCTAATGGCG TGATCCTGAT CACCACCAAG CGCGGTAAGG AAGGCCAGAG CCGGGTCGAT
TACGATGGCT CCTACTCGTT CCAGACAATT GCTCGCGGAG TGGAAGTGCT GAATGGCTCC
GACTACGCCC GCTACATCAA TATGCTCGAA CGCAGCCAGG GCGGCAGCCC GCGCTATACC
GATGCGCAGA TCTCGCAAAT CGGGGCCGGT ACCAATTGGT GGGATGTCAT TTCGCGGACG
GGCGCGCTGT CGAACCATCA GCTTTCGTTC ACCGGCGGCA CCAAGGGAAT GCGCTATGCA
TTTGTGGGTA ATTATCTAGA TAACAAGGGT ATTATCAAAA ATACAAACTT CAACCGCTAC
GGCTTCCGGA TGAATCTCGA CAACGATTTT CTGAAAGGGA AGGCGACGCT GACCAACAGC
TGGTCGTTCA ACCGTTCGGG AAGCAGCAAT GTGCCTACCG ACCGCGGCGG CCCGGGCGGG
ATCGTGATCA CGGCATTGGG CCTGGACCCG ACGGGGCCGG TTTATGACCA GAACGGCGCA
TACCAATATG CAAGTTACGA CCAGCGCTTC CTGACCAACC CCCTGGCCGA GGCCGTGGAA
GGTTACGACA AGGACTATAC CAACCGCCTT TTCGGTACTT CCGCGCTGAC CGTGAACATT
TTGGAAGGCC TTAAATTCCG CACAAGCCTT GGCCTCGACA TCGTGAACGC CCGCCGGACC
ACGTTTTACA ACAACTACAC CTACCTCGGC CGCCAGAACG GACGAGAATT GCAGAAAGCA
AACCGTAATT CCAATAACAT CCTGAATGAG AACATTTTAA CATACAATAA AGAGATCGCC
AAAGGGCATT ACCTCGATGT GACGCTGGGC TATACCTATC AGAAAGAGGT CAATTATCTA
GAATCCAATG CTACCCGCGG GCTGTCTTCG GACGATATCG AGGCGGTGAA TATGAACAAT
GGAAGCCGCC CGCTCGTACC GAACTCGGGC CGGCTGGAAT GGGAGCTGAT GTCTATGCTG
GGGCGGATCA ATTATAATTT GAAAGACCGC TACTTGTTTA CGGTAACGCT CCGTCGCGAC
GGTTCATCCA AATTCGGTCC GAACAACAAA TGGGCGACAT TCCCTTCCGC GGCCATCGGC
TGGCGCATGG TGAATGAGGA GTTTTTCAAA AACTCCGGGC TCGGGAAAGT GTTCGACGAT
TTCAAGATCC GCGCGAGCTA TGGGCTTACC GGTAACTCGC AAATCCCTGT TTACCGCTCG
GTAGCTGGTT TGGTGCCTTA CAATTACGTT TTCGGTATCA CGCCAACCCT GGTGTCCGGT
TACGCGCCCA ACCGTATCCC CAATTCGGAC TTGAAGTGGG AAAGCACCTC GATGCTGAAT
GTCGGACTCG ATTTTGCATT GATCAACAAC CGCCTGAGCT TGACGATTGA TGCTTTTAAG
AACAAAACGA CCGATCTCCT GCTCGATGTT TCGATCCCGC AAAGCACCGG ATTCAGCACG
ATTATGCTCA ATTCCGGCTC GCTAAGCAAC AAAGGGCTTG AATCCGCGGC AAACTACAAG
CTGATCAGCA ACAATACGCT GACCTGGGAC GTGAGCGGAA ATGTGTCGGT ACTGCGCAAC
AAAATCCTCG ACCTCGGCAA AAGCACACCG TTCTTCTCGA ACAGCACCAG CGGTCACCTT
GGCGTGCTGG GTAGCTGGGT GGAAGCCGGA AATCCGATCG GCGTTTGGAG CGGGTACAAC
TACATTGGCC TGTTCCAATC GGATGAGGAA GGAAAAAGCT ACTCGGCCAG AGCAGGTTAT
CCCAAATATG AAGATGTGAA CGGTGACGGT AAATACACCA CCGACGACTT CAAGATCATC
GGCGACCCGA ACCCTAAACT GACCTGGGGC TTCAATACCA GCCTGAAATA CAAGGGCTTC
GACCTGGCTG TATTCTTCCG CGGCGTGCAC GGCAACAAAA TCCGCAACCT GCAACAATCC
GAAATGGGCG ACGGCGTGCA GAAGATCAAC CAGATCTCCA ACATCCTGAC CGACTCGTGG
ACGTCGGAAA ACCCGAATGC GCCCCGCCCG GTAATCGACG GTCGCCGCGA CTTCATTTCT
TTCCGCCGGT CGTCATTCTT CATCCAGGAC GGATCATTCG TGCGCCTGCA AAACCTCTCG
CTCGGATACA CGCTGCCGGT CAAGAGCGCC TACATCCGCA ATGCGCGCGT GTATGTGAGC
GGCCAAAACC TCTTTTTGAT CACCAAGTAC AAGGGCTTCG ACCCCGAAGT GAACAACCAG
GGCCAGAACA ACCTCAACCG GGGCGACGAT TACGATGCCT ACCCCCGGTC GCGCATGTTC
ACATTGGGCG TTAATCTTGG TATTTAA
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| Protein sequence | MVMKITFAQI LFAVVFTTLT HAASEGRAQE VMERLVTIHA QNAELRNVLR DIEEQADVKF
AYSQKSIRAE RTVDVHINRQ KLSTVLSTLL DPLHIAYELT AGRILLTAET GAVAEPQQPE
PAQAAAAQAL AQVKGKVIDE NNAGLPGVSV IIKGTQKGTT TDQEGAFALD VIEQNAVLVF
SFVGYKPQEV TVGGQTNLSV TMQPDNQALE EVVVVGYGSV RKSDLTGSVA SIKGDAIREM
PVTSVDQAIQ SRAPGVQVTQ TSGAPGGGIS IRVRGANSIN SGSEPLYVID GFPIYPDNGA
LGTSGNRQPT NAMATINPNE IESIEILKDA SATSIYGSRG ANGVILITTK RGKEGQSRVD
YDGSYSFQTI ARGVEVLNGS DYARYINMLE RSQGGSPRYT DAQISQIGAG TNWWDVISRT
GALSNHQLSF TGGTKGMRYA FVGNYLDNKG IIKNTNFNRY GFRMNLDNDF LKGKATLTNS
WSFNRSGSSN VPTDRGGPGG IVITALGLDP TGPVYDQNGA YQYASYDQRF LTNPLAEAVE
GYDKDYTNRL FGTSALTVNI LEGLKFRTSL GLDIVNARRT TFYNNYTYLG RQNGRELQKA
NRNSNNILNE NILTYNKEIA KGHYLDVTLG YTYQKEVNYL ESNATRGLSS DDIEAVNMNN
GSRPLVPNSG RLEWELMSML GRINYNLKDR YLFTVTLRRD GSSKFGPNNK WATFPSAAIG
WRMVNEEFFK NSGLGKVFDD FKIRASYGLT GNSQIPVYRS VAGLVPYNYV FGITPTLVSG
YAPNRIPNSD LKWESTSMLN VGLDFALINN RLSLTIDAFK NKTTDLLLDV SIPQSTGFST
IMLNSGSLSN KGLESAANYK LISNNTLTWD VSGNVSVLRN KILDLGKSTP FFSNSTSGHL
GVLGSWVEAG NPIGVWSGYN YIGLFQSDEE GKSYSARAGY PKYEDVNGDG KYTTDDFKII
GDPNPKLTWG FNTSLKYKGF DLAVFFRGVH GNKIRNLQQS EMGDGVQKIN QISNILTDSW
TSENPNAPRP VIDGRRDFIS FRRSSFFIQD GSFVRLQNLS LGYTLPVKSA YIRNARVYVS
GQNLFLITKY KGFDPEVNNQ GQNNLNRGDD YDAYPRSRMF TLGVNLGI
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