Gene Dfer_3702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3702 
Symbol 
ID8227287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4505740 
End bp4508508 
Gene Length2769 bp 
Protein Length922 aa 
Translation table11 
GC content55% 
IMG OID644931534 
Productprotein of unknown function DUF1549 
Protein accessionYP_003088072 
Protein GI255037451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACCA GATTTTTGAT CGGTTTAGTG GTAGTGGCCG TGCCGGTAGC ATACTTTTCG 
TGGGTCGGGC TGTCCGGGGG CGGTTCGCCG CTGGGCAAGA AGGTCGATTA CAATGCAGAT
GTGAAGCCGA TCCTCAACAA ACATTGCATG GGCTGCCATG GCGGTGTGAA AAAGGCCGGC
GACGTGAGTT TTCTGTTTGA ACACGAAATG CTCGAACCGG GCAAATCGGG CAAAATACCA
GTAGTACGCG GCGACGCCGA CGCCAGTGAG ATGATCCGGC GCATTCTGAC GGACGATCCC
GACGAGAAAA TGCCGAAAAA CGGCACGCCC CTCACCGACG ACGAGGTGGA TATCCTCAAA
CAGTGGATCG ACGATGGTGC CGAATGGGAA ACGCATTGGG CCTATAAAAA GATTGAAAAG
CCTGACGTGC CCTCGCTGAA CAGCTTTTCA AACCTTTTTG GCTTGCTGGA TAAAGGCGAC
AAAGCCTGGG CTAAAAACGA AATCGACCAT TTTGTTGCCA AAAAACTGAA ACAGGAAGGC
CTGAAAACCT CTCCCGAAGC CGACCGTGCG ACATTACTCC GGCGGGTAAG TCTGGATATC
ACCGGCTTAC CGCCTACCGA AAAGGAGGTG ATGGATTTTG TGAATGACAA ATCGCCCGAC
GCTTACGAAA AAAGGGTGGA TAAGCTTCTG AAATCGCCTG CTTACGGGGA AAAATGGACG
TCGATGTGGA TGGACCTCGC GCGCTATGCC GATACCAAGG GCTACGAAAG CGACGGCGGC
CGCACGATGT GGCGCTATCG CGATTATGTG GTCAAATCTT TCAACGAGGA CAAGCCTTTC
GACCGCTTCA CCATCGAACA GCTGGCCGGC GACCTGCTGC CTGAAAAGAA AGATGCCTTC
CCGAAAGAAG AAAACGTGAT CGCCACCGGC TTCCACCGCA ATACCATGAC CAATAATGAA
GGCGGAACAG ACGACGAAGA GTTTCGTACC GCCGCGCTGA TCGACCGGGT CAACACCACG
TGGGAGGTCT GGCAAGGGAC TACATTTGCC TGTATCCAAT GCCACAGCCA CCCTTACGAC
CCGATCCCGC ACGAAGACTA CTATAAATAC GCAGCATTTT TCAACAACTC CCGCGACGAG
GATGTATGGG ACGAATGGCC GAAGCTGCGG TTTTACAAAG GCGAAGACTC GGCACGCTTC
GAGCGCGTAA AATCGTGGGT GAAGCAATAT AATCCGCAGG ATTTGGAAGC GAAAACGCAG
TTCATGAAGG TGGTGGAGCC GAAGATCAAC GCCCATAACT TCGAGAAGGG CGATCAGTCC
ACGGTGCTGG TCATTTCCTA TTATGGAGTG AAGGACAAAG GCAATGCGCG CATTCCGCAG
GTGAACCTCA CCGGCGCCGA TAATGTGCTG ATGAACATCG GTACCAAAGC TGAAAACGCG
GTATTGACCT TGCATCTGGA CAAACTCGAC GGCCCGGTGC TGACGACCAT CAAAGTCCCG
ACGCGCGACA CGGTGATCAT CGCGCCGATT ACGAAAACCA GCGGCAAGCA CGACATTTTC
CTTTCACTGC ATAGTCCAAA GGCACCGGAA GAATGGGTGC GCATTACCTG GGCTGCGTTT
CAGCCGGCAT TGCCGGGCAG TTCGGCACCC GGTTACCAGC AAGTTGTAGC CGATTATGCA
ACCGTTTTAA CCCGACCTAC CGAAAGCATG CCCGTGCTGT GGGAAGGGAA AGGCGATTTT
GCAAGAAAAA CCAATGTATT CGTCCGGGGT AACTGGATGG TAAAAGGCCC GGAAGTGAAG
CCGGATGTGC CCAAACTCCT CGCGCCCCTG CCCAAAGACG CCTCGCGCGA CCGGCTGGGC
CTCGCGAAAT GGATCGTAAG CCGCGACAAT GCGCTGACAG GCCGGGTGGT TGTAAACCGT
TTCTGGGAGC AGCTTTTTGG AAGGGGCATT GTGGAGACGG TGGAAGACTT CGGATCGCAG
GGTGCCGAAC CGTCACACCC CGAGCTGCTC GACTGGCTGG CGGTGTCGTT TATGGACGAT
TACAAATGGA GTGTTAAAAA ACTGCTGAAA ACAATCGTAA TGTCGGCTAC CTACCGGCAG
GACTCGCGCT CCGACAACCA ACGAAAGGAA AAAGACCCGT ATAACATGTG GCTCTCCCGC
GGCCCGCGCG TACGACTGAG CGCCGAGCAG GTGCGCGACC AGGCCCTGGC TTGCAGCGGA
CTCATTTCAG ATAAAATGTA CGGCCCGAGC GTAATGCCGC CTCAGCCAGA CAAGGTCTGG
CAGTCGCCTT ACAGCGGCGA AAGCTGGGTG GTGAGCGAGG GAGAGGACAA ATACCGCAGG
GGCGTTTATA CTTACTGGAA AAGAACGGCG CCGTACCCTT CGATGACTAC TTTCGATGCG
CCTAGCCGGG AGTTTTGCCA GTCGCGACGG ATCATTACCA ACACGCCGTT GCAGGCGCTG
GTGACGCTGA ACGACCCGGT ATACCTGGAA GCGGCTGAAA AGCTGGCCTC GAAAATGAAA
ACGCGCGGAA AAACGCCCGA GCAGCAGCTC AAAGAGGGGT ATCGCTTGCT GACCTTCAAA
GCGATTGAGC CGAAAAGCCT CAATGTCCTG TTGAAAGTGT ACCAGGATGC CTTGCAGGAA
TACCGGCAGA AGCCCTCGGA AATGGATAGC ATATTGATTT ACGGAAAAGA AAAATCACCC
GAGCTGGCCG CGCTCACCGT TTCGGCGAAT GTGCTGCTGA ACCTCGATAA TGTGGTGACC
AAGGAATAA
 
Protein sequence
MHTRFLIGLV VVAVPVAYFS WVGLSGGGSP LGKKVDYNAD VKPILNKHCM GCHGGVKKAG 
DVSFLFEHEM LEPGKSGKIP VVRGDADASE MIRRILTDDP DEKMPKNGTP LTDDEVDILK
QWIDDGAEWE THWAYKKIEK PDVPSLNSFS NLFGLLDKGD KAWAKNEIDH FVAKKLKQEG
LKTSPEADRA TLLRRVSLDI TGLPPTEKEV MDFVNDKSPD AYEKRVDKLL KSPAYGEKWT
SMWMDLARYA DTKGYESDGG RTMWRYRDYV VKSFNEDKPF DRFTIEQLAG DLLPEKKDAF
PKEENVIATG FHRNTMTNNE GGTDDEEFRT AALIDRVNTT WEVWQGTTFA CIQCHSHPYD
PIPHEDYYKY AAFFNNSRDE DVWDEWPKLR FYKGEDSARF ERVKSWVKQY NPQDLEAKTQ
FMKVVEPKIN AHNFEKGDQS TVLVISYYGV KDKGNARIPQ VNLTGADNVL MNIGTKAENA
VLTLHLDKLD GPVLTTIKVP TRDTVIIAPI TKTSGKHDIF LSLHSPKAPE EWVRITWAAF
QPALPGSSAP GYQQVVADYA TVLTRPTESM PVLWEGKGDF ARKTNVFVRG NWMVKGPEVK
PDVPKLLAPL PKDASRDRLG LAKWIVSRDN ALTGRVVVNR FWEQLFGRGI VETVEDFGSQ
GAEPSHPELL DWLAVSFMDD YKWSVKKLLK TIVMSATYRQ DSRSDNQRKE KDPYNMWLSR
GPRVRLSAEQ VRDQALACSG LISDKMYGPS VMPPQPDKVW QSPYSGESWV VSEGEDKYRR
GVYTYWKRTA PYPSMTTFDA PSREFCQSRR IITNTPLQAL VTLNDPVYLE AAEKLASKMK
TRGKTPEQQL KEGYRLLTFK AIEPKSLNVL LKVYQDALQE YRQKPSEMDS ILIYGKEKSP
ELAALTVSAN VLLNLDNVVT KE