| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3698 |
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| Symbol | |
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| ID | 8227283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4501283 |
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| End bp | 4502215 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931530 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003088068 |
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| Protein GI | 255037447 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGTC GGCACTTTAT CCACAACGCC ACAGCTGCGG TCACCACTGC GGGTGCACTC
ACTTCCTTTG AATCCATTGC CGATGCAAAC AAGGCCAGTG TCCAGTTCGA GAATAAACTT
TCCTTGAAAG TGCTCGGCAC GAACTGGGGC TTCAAAGGCA CTACTGATCA GTTTTGCGAG
GCGGTTAAAA AGGAAGGCTA CGACGGCATC GAAATGTGGT GGCAGGGCTC GAAAGAGAAA
CAAAAGGAGC TTTTCGACGC ATTGAAAAAG CATAACCTCG AAGTAGGGTT CCTCTGCGGA
TCAGGCGAAA AGGATTACCA GACGCATTTG AATGTATTTA AATCGCAGAT TAACGCGGCT
ACCACGCAAT GGCCCGTGAA GCCGCTTTAC ATCAACTGCC ACAGCGGCCG CGACCATTTT
ACCTACGAAC AAAACAAGGC ATTTATAGAC CATACCACCG AAGCCAGCAC GAAAAGCGGC
ATTCCGATTT ACCACGAAAC CCATCGCGGA AGGATGCTTT TCGCCGCCCA TATCGCCCGG
AATTTCATCG AGAAAAACCC CGCATTACGC CTCACGCTCG ACATTTCGCA TTGGTGCAAT
GTGCATGAAA GCCTGTTGCA GGACCAGGAA GAAACTGTTC AGCTGGCGCT GGCACGCGTG
GGGCACATCC ACTCGCGCGT GGGCCACGAG GAAGGGCCGC AGGTGAACGA CCCGCGCGCG
CCGGAATGGG AAGCGGCTGT AAAGGCGCAT TTGGCCTGGT GGGATAAAGT GGTGGAATAT
AAGGTCAAAA GCGGTGAAAC GCTGACTGTG CTGACTGAAT TTGGCCCGCC GAATTATCAG
CCAACCGTAC CGTTCACACA TCAGCCGCTG TCGGACCAGT GGGGCATTAA TGTGCATATG
ATGCATTTGT TAAGAAAGCG GTACCTGAAA TAA
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| Protein sequence | MNRRHFIHNA TAAVTTAGAL TSFESIADAN KASVQFENKL SLKVLGTNWG FKGTTDQFCE
AVKKEGYDGI EMWWQGSKEK QKELFDALKK HNLEVGFLCG SGEKDYQTHL NVFKSQINAA
TTQWPVKPLY INCHSGRDHF TYEQNKAFID HTTEASTKSG IPIYHETHRG RMLFAAHIAR
NFIEKNPALR LTLDISHWCN VHESLLQDQE ETVQLALARV GHIHSRVGHE EGPQVNDPRA
PEWEAAVKAH LAWWDKVVEY KVKSGETLTV LTEFGPPNYQ PTVPFTHQPL SDQWGINVHM
MHLLRKRYLK
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